Clupea harengus (Atlantic herring): 122129008
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Entry
122129008 CDS
T09045
Name
(RefSeq) immunoglobulin gamma-1 heavy chain-like
KO
K06856
immunoglobulin heavy chain
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04020
Calcium signaling pathway
char04145
Phagosome
char04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122129008
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122129008
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
122129008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
122129008
Membrane trafficking [BR:
char04131
]
Endocytosis
Phagocytosis
Opsonins
122129008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
V-set
Ig_3
I-set
Ig_2
ig
C2-set_2
Motif
Other DBs
NCBI-GeneID:
122129008
NCBI-ProteinID:
XP_042559987
LinkDB
All DBs
Position
Unknown
AA seq
545 aa
AA seq
DB search
MMLLGGGIVLTFFSYVYGQSLTSSGPVVKRPGEAVTLSCSVSGFSMSSYWMSWIRQKPGK
GLEWIGYIDTGTSTTFSQSLQGQFTTTRDNSKRQVFLHMSNLRPEDTAVYYCARESQRQY
GFDYWGKGTMVTVAPDTVTNASISTMGQCQTNSSASKTYACVTTGPFPGESAKFTWTKGG
QPVRDFVEYPAVHKSGDDYTRVSTINALLKSDEDMTCTVTHQAGHIKKSVRVDPKSPTLS
LFQISTTKGRYLLCAIEEFYPKEITVKWMEGTTVIGSKSEEIITKHLGYYYAKSFLELSS
VAGDKHVSYTCEVTHSQQPFQVTKSFEAHFSVELTPPSSRDIFLNNKAVLECVTTGTDSA
AVKDAKVTWKVGGGDQSSRAEQGTLKALDNGQFSKVSKLEVDVSDWFSGKEVECLVYDKT
EGKNIVGKKKIKQGGAAPEVFIYTLPEAKDPNHVSLVCEVRGSSLGDVYIMWQFGEGKYQ
EGKTALLKQDDGNTSLVSILIDKSLKKSEASRFTCAVKHGGMKNYSAPLQVTYSKRKYSE
CPVCV
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttttaggtggtggcattgttctgactttcttttcatatgtttatggccagtcc
ctgacctcctctggtccagtggtgaagagacctggagaggcagtcactctgtcctgctct
gtgtctgggttttccatgagcagctactggatgtcctggatccgtcagaaaccaggaaag
ggactggagtggattgggtatattgatacaggcactagcacaacattttcccagtctctc
cagggccagttcacaacaactagagacaacagcaagagacaagtctttttacacatgagc
aatctgagacctgaagacacagctgtgtactactgtgctcgtgaatcacaaaggcagtat
ggttttgattactgggggaaaggcacaatggttactgttgcaccagatactgtgaccaat
gcatccatctccaccatggggcagtgccaaacaaactccagtgcgtctaaaacatatgct
tgtgtcaccactgggcccttccctggagagtcagcaaagttcacgtggaccaaagggggt
cagccagtgagagacttcgtcgagtatccagcggttcataagtctggtgatgactacacc
agagttagcacgattaatgctctgctaaaatcagatgaagatatgacatgtaccgtgact
caccaggctgggcatattaaaaagagtgtaagagtggatcctaagtctcctactttgagc
ctgtttcaaatatccacgacaaaaggtcgatacctcctgtgtgccattgaggaattctat
ccaaaagaaattacagtaaagtggatggagggtacaactgtcataggcagtaaatctgaa
gaaattatcaccaaacacttaggatattactatgcaaagagctttctggagctgagtagt
gttgcaggagataaacatgtttcttacacatgtgaagtaactcattctcagcaaccattc
caagtgacaaaatcatttgaagcccacttctcagtagagctaactcccccatcatcaaga
gatattttcctcaacaataaagcagttctggagtgcgtcaccacgggaacagactcagca
gctgtgaaagatgctaaagtaacatggaaggtgggaggaggagatcagagtagcagagct
gaacaaggcacccttaaagccctcgataatggtcagtttagtaaggtcagcaaactggag
gtggacgtgtctgactggttctctggaaaagaggttgagtgcctcgtgtatgacaagact
gagggcaaaaacattgtgggaaagaagaaaataaagcaaggtggagcggctcctgaagtg
tttatctacaccctccctgaagccaaagacccaaaccatgtttctctggtgtgtgaggtc
aggggctcttctcttggtgatgtgtatatcatgtggcagttcggtgaaggaaagtaccag
gagggaaagacggccctcctgaaacaagatgatggcaacacgtcacttgtcagtatactg
atcgacaaatcactgaagaaatcagaagcatcacggttcacctgtgcggtcaaacatggc
ggaatgaaaaactactctgccccgctacaagtcacttactcaaaacgtaaatactcagag
tgtcctgtctgtgtttaa
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