Clupea harengus (Atlantic herring): 122129266
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Entry
122129266 CDS
T09045
Symbol
smcr8a
Name
(RefSeq) guanine nucleotide exchange protein smcr8a
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122129266 (smcr8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
122129266 (smcr8a)
Membrane trafficking [BR:
char04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
122129266 (smcr8a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
PRR11_2nd
ERM_helical
Motif
Other DBs
NCBI-GeneID:
122129266
NCBI-ProteinID:
XP_042560189
UniProt:
A0A8M1KE84
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MIGSPDVVAFTKEDDFGELFPDPCVLPEEFSVPLFTHAANPWTKTAYAKFSKDFILISEF
SEQVGPQPLLTIPDDSKVCGTFDLNYFSLRIMSVDYQASFVGHPPGSSYPKLNFVEDSKV
VLGDSKEGAFAYVHHLTLYDLEARGFVRPFCIAYISADERKIMQQFQKLSSEFSKASECL
KSGNRKAFANELLKKLKDLEYTRSVLHKESELQKMNNGCYSTQAIEKANELANMEKSIYE
HKDLLRQITSYPSRKRKDPECVAYEPEKPTDMTDVNLALSSTPSELEDKTVSGDEANDRL
SYTPQLIKARSAKCFDKRLKTLEELCETTFFQHTMEQLKFIERSFRGDLCYMYTSQIDRA
LVRRQQITNFLFEEEEDWQEDGLTKRFEAAGPPAVNQPPSASDMLAEPMSLESYSSCVDT
IQIKPEPEFVEGPPESSPSDFTQETSEEAADTETKGSFSSDRSIEPVSPGNLQMQYQDTE
VVGMSSSSEECTTLADNAFLDQCEADPSSALYETPSVQTGTDRAVHTFPLLENDLDMNAT
DVYQTGSVQVDTACCMGQEGFIHEEPLPKPLRGGCGDMVVKQEPLSLLQRDPSLQGDYVL
GEPALESPSTALSLPELNSNTLSEEMARINVEDASDTTSYMSTSTSSDRAPSPFCHGNPV
TLKQKKRAGQSALRFIRQYPFAQQAIFCLLTGRTLVVLGAEEGTVRKLVNALSIFVPNLG
KYGETVQPWLSTPFQLTDLQRWKLIGLQRMASPTESSILHSLIRYSRYIGILDADNKTMR
CPPYKGALLGHMADHRTQIKRGSTYFLHVQSMLTQLTAKAFLFTFCHHFHLPLSSAEDEE
SVVTHRTSFLHHLGYTEEESKIVHFLSELIKQHYIQGPSKGTSQSVLRFNYTTSYLYKI
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgatcggctcaccagacgtggtggcttttaccaaagaagatgactttggagagctcttt
ccggatccgtgcgtgctcccggaggagttttctgtgcctttgttcacccatgctgcgaat
ccgtggacgaagaccgcctatgctaaattttccaaggacttcatcctcatatccgagttc
tctgaacaggttggtccacaacctctcctcaccattcctgatgactcaaaagtatgtgga
acattcgacctcaattatttctcactgcgcatcatgtccgtggactaccaagcctcattt
gttgggcaccctcctgggtccagctacccaaagctcaattttgtggaggactctaaagtg
gttctgggtgattcaaaggagggtgcctttgcctatgtccatcatctgaccctgtatgat
ctggaagcacgaggctttgtcaggccattctgcatagcctatatctccgcagacgagaga
aagattatgcagcagtttcagaagctctcctctgagttttccaaagcctcagagtgtttg
aaaagtgggaaccgaaaagcttttgcgaacgagctgctgaagaaactgaaagatctggag
tacacccggtcagtgctacacaaagagagtgagctgcagaagatgaacaacggctgttat
tccacacaggcaattgagaaggcaaatgaattggcaaatatggagaagtccatatatgaa
cacaaagacctgttgaggcagatcacttcctaccccagcagaaagaggaaagaccctgaa
tgtgttgcgtatgagccagagaaacccaccgacatgaccgatgtaaaccttgcactctcc
tccactccttctgaacttgaggacaagacagtatcaggggacgaggccaacgatagactc
tcctacactcctcagctcatcaaggctagatctgctaaatgttttgacaagcgactaaaa
acgctagaggagctttgcgaaacaacttttttccaacataccatggagcaactgaaattc
attgaaaggtctttcagaggggatctgtgctacatgtacaccagccagatagacagggct
ctcgttaggcggcagcaaataacaaattttctctttgaggaggaggaggactggcaagaa
gacggactcacgaagcggtttgaagcagctggtccccctgcagtgaatcaaccaccctca
gcgtccgacatgttggcagaaccgatgagtctggaatcgtattcgtcctgcgtggacacc
attcaaataaaaccagagcctgaatttgtagagggccccccggagtccagcccttctgat
ttcactcaggaaacctctgaggaagctgctgacacagaaacaaaagggagcttcagtagt
gaccgaagcatagagcctgtaagcccaggcaacctacagatgcaatatcaagatactgaa
gtagtggggatgagctctagcagtgaagaatgtactaccctagccgacaatgcatttttg
gaccagtgcgaagccgacccttccagtgcattatatgaaaccccctctgttcagaccggg
acagacagagctgtacatacatttcctttattggaaaatgacttggacatgaatgctact
gatgtgtaccaaactgggagtgttcaagtggacacagcttgctgtatggggcaggagggc
ttcatccatgaagagcctttgcccaagccgctccggggcggctgtggggacatggtggtg
aaacaggaacctctgtctttgcttcagagggacccttcactccagggggactatgtttta
ggtgagcctgccttggaaagcccttccacagccctgtctctccctgagcttaactcgaac
acgctctctgaggagatggccaggattaatgtggaggacgcctctgacactaccagctac
atgagcacctccaccagttctgacagggcaccgtcaccattctgccacgggaacccggtc
accctgaaacagaagaagagggcaggacaaagtgctctgcgattcatccggcaatacccc
tttgcacagcaagccatattctgcctcctgaccggacgcactctcgtggtgctgggagct
gaggaaggcacggtgagaaagctggtgaacgctttgtctatttttgtgcccaaccttggg
aaatacggagaaactgtacagccatggctctcgacaccctttcaactgactgacctacaa
agatggaagctcatcggccttcagaggatggcctcacccacggagtccagcattctccac
tctctcatccgctacagccgctacataggtatccttgacgcggacaacaaaacgatgagg
tgccctccgtacaaaggcgctctactcggccatatggcagaccacaggactcagatcaag
aggggaagcacttacttcctccacgtccagagcatgctgacccagctcaccgccaaggca
tttcttttcaccttctgccatcattttcaccttcccctcagctctgctgaggacgaagag
tccgtggtgacgcacaggactagctttttgcatcatttgggctacactgaggaagagagc
aaaatcgtgcacttcctcagtgagctcatcaaacagcattacattcaggggccttccaag
ggaaccagccaatcagtcttacgttttaattacaccaccagctatttgtacaaaatctaa
DBGET
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