Clupea harengus (Atlantic herring): 122130602
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Entry
122130602 CDS
T09045
Name
(RefSeq) LOW QUALITY PROTEIN: 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1-like
KO
K01116
phosphatidylinositol phospholipase C, gamma-1 [EC:
3.1.4.11
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00562
Inositol phosphate metabolism
char01100
Metabolic pathways
char04012
ErbB signaling pathway
char04020
Calcium signaling pathway
char04070
Phosphatidylinositol signaling system
char04370
VEGF signaling pathway
Module
char_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
122130602
09130 Environmental Information Processing
09132 Signal transduction
04012 ErbB signaling pathway
122130602
04370 VEGF signaling pathway
122130602
04020 Calcium signaling pathway
122130602
04070 Phosphatidylinositol signaling system
122130602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
122130602
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
122130602
Membrane trafficking [BR:
char04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
122130602
Endocytosis
Macropinocytosis
Phospholipase C
122130602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
SH2
PI-PLC-Y
EF-hand_PLCG2
PH
SH3_1
C2
SH3_9
EF-hand_PLCG1
SH3_2
GDPD
PH_12
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
122130602
NCBI-ProteinID:
XP_042561270
UniProt:
A0A8M1KFH0
LinkDB
All DBs
Position
Unknown
AA seq
1245 aa
AA seq
DB search
LVSPLLAVDIREIKEIRPGLKSRDFERYMEDSTARLDHNHCFVVLYGTEFRLKSLSLAAT
SDEEMAMWVKGLTWLVADTLKSPTPLQIERWLRKQFYSVDRNREDKISCKDLKNMLCQVN
YRVPXHEVSCERKLPDGELRNGDVSYCQFAQLYRSLMFEAQKTMEIPFLQRYRPSRGITL
EEFKSFLLEFQKEMWATDNNKVQEFMFSYLKDPLREIEQPYFCQDEFLSYLFSRENTIWN
DTWDQVRPEDMNNPLSHYWISSSHNTYLTGDQFSSESSLEAYARCLRMGCRCIELDCWDG
PDGMPVIYHGHTLTTKIKFSDVLATIKEHAFVTSEYPIILSIEDHCSIVQQRNMATFFKK
VFGEMLLTKAVDISADGLPSPNQLKRKILIKHKKLAEGSSYEEVSTSTPYSENDISNSIK
NGILYLEDPINHEWYPHFFVLTSSKIYYSEETTSNQGNDDEEEHREVCNGMDQHVTEKWF
HGKLGAGRDGRQIAERLLSEYCVETGAPDGSFLVRESETFVGDYTLSFWRSGRVQHCRIH
SRQEAGSPKFYLTDNLVFDTLFALITHYQTVALRCNEFEMKLTEPVPQTNAHESKEWYHA
NLSRSQAENMLMRVPRDGAFLVRKRAEFSSYAISFRAEGKIKHCRVQQEGQTVVLGTSEF
DSLVDLISYYEKHPLYRKMKLRYPINEETLEKIGTAEPDYGSLYEGRNPGFYVEANQMPT
FKCTVKAMYEYKAQRDDELSFSKNSIISNVDKQEGGWWKGDFGGKKQLWFPANYVEEISP
TAVEPDRTQLTENSPLGDLLRGSVEVSSCQIVVRTEGKGSRPFVFSLVSSATPRAPVLDI
AASSQEELKDWVIKIREVTMTSEAKLEEGKIMERRKKIALELSDLVIYCRPVPFDEDKIG
TERACFRDMSSFPETKAEKYVNRIKGKKFLQYNRLQLSRIYPKGQRLDSSNYDPLPMWLC
GSQLVALNFQTADKPMQMNQALFMLNGKSGYVLQPPIMRDDSFDPFDRNSLRGMEAITLV
IEVLGARHLPKHGRGIVCPLIEIEVCAADYDSAKLKTDSEADNGLNPTWPRKSFRFSVCN
PAFAFLRFGVYEIDMFSDQNFLAQATFPINGLQTGYRSVPLKNSYNEDLELASLLVHMEI
VRGRTHENGETSPFLTPSSVGLGSYVGRERMGESGSVSSASSMSPLPSSPGQALGYRARE
NSFEARYQPPLDEFRVSPQDALLDHVDPQNRRPMRRTRVGGENRV
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
ctcgtctctcctctcctggcagtcgatatcagggagatcaaggagatccgccccgggctg
aagtcacgcgactttgagcgctacatggaggactcgaccgctcgactcgaccacaatcac
tgcttcgttgtcctctatgggactgagttccgcctcaagtccctcagccttgcagcaaca
tcagatgaggagatggcgatgtgggtgaagggcctgacatggctggtggccgacacactc
aagtcccccactcctctccagatagaaaggtggttacggaagcagttttactccgttgat
cgcaacagggaggacaagatttcctgcaaagacctgaaaaacatgctgtgtcaggtcaac
tacagagtaccctaacatgaggtttcctgcgagagaaaactcccggatggggagctgaga
aacggcgacgtctcctactgtcagtttgcccaactctatcgcagcctcatgtttgaagcc
cagaaaacaatggagattccttttctgcagaggtatcggccgagcagagggattacgctg
gaagaattcaagtcttttctcctggagttccagaaggagatgtgggccactgataacaac
aaggtgcaggagttcatgttcagctacctgaaggaccctctgagggagatcgagcagccg
tatttctgccaggacgaattcctctcctacctgttctccagggagaacaccatctggaac
gacacgtgggaccaggtgcgacccgaggacatgaacaacccgctgtctcactactggatc
tcctcctctcacaacacctacctgacgggagaccagttctccagtgagtcatcgctggag
gcttacgctcgctgcctgcgtatgggctgcagatgcatcgagttggattgctgggacggc
ccggatggaatgcctgtcatctaccatggtcacaccctcaccaccaagatcaagttcagc
gatgtcctggcgacaatcaaagagcacgcctttgtcacctctgagtatcccatcatcctc
tccatcgaggaccactgcagtattgtccagcagaggaacatggccaccttcttcaagaag
gtgtttggagaaatgttgctaaccaaagcagtggacatctccgctgacgggctgccctcg
cccaatcagctgaagaggaagatcctcatcaagcataagaagctagccgagggaagttcc
tacgaggaagtgtccacttccacgccctactctgagaacgacatcagtaattccattaag
aatggcatcttgtatctcgaggacccaatcaaccatgagtggtaccctcacttcttcgtc
ctcaccagtagcaagatttactactcggaagaaacgacaagtaaccagggcaacgatgac
gaggaggagcacagagaggtgtgtaacggcatggaccagcatgtaactgaaaaatggttc
catgggaaactgggcgcggggcgtgacggtcgtcagatcgccgagcggctgctctcggag
tactgcgtggagacgggcgcccccgacggctccttcttagtgcgcgagagcgagaccttc
gtgggagactacaccctctccttctggcggtccggtcgggtccagcactgtcggatccac
tcgcgtcaggaggcgggcagccccaagttctacctgacggacaatctggtgtttgacacg
ctgttcgcccttatcacccactaccagacggtggcgctgcgctgcaacgagtttgagatg
aagctgaccgagcccgtgccccagaccaacgctcacgagagcaaagagtggtaccatgcc
aacctgtcccggagccaggctgagaacatgttgatgcgggtgccacgggacggggccttc
ctggtcaggaagagggcagagttcagctcctacgccatctccttccgagcggagggaaag
atcaagcactgtcgggtgcagcaggagggccagaccgtggtcctgggcacgtctgagttc
gacagcctggtggacctgatcagctactatgagaagcacccgctgtaccgcaagatgaag
ctgcgctaccccatcaacgaggagacgctggagaagattggcactgctgagcctgactat
gggtctctgtatgagggccggaaccctgggttctatgtggaagccaaccagatgcctaca
tttaagtgcacagtgaaagccatgtatgagtacaaggcccagagagacgacgagctctcg
ttcagtaagaactccatcatctctaacgtggacaagcaggagggcggatggtggaaaggt
gactttggaggcaagaagcagctttggttcccagccaactacgtggaggagatcagccct
actgctgtggagcccgacagaactcaactgacagagaacagccctctgggagatctcttg
agaggaagtgtggaagtgtcttcctgtcagatagtggttcgcacggaggggaagggcagt
cggccgtttgtcttctcgctggtgtcgtccgccacgccgcgggcgcccgtgctcgacatc
gccgccagctcccaggaggagctcaaggactgggtcatcaagatccgtgaggtcaccatg
acctctgaggctaagctggaggaagggaagattatggagaggaggaagaagatcgccctg
gagctctcggacctggtcatctactgccggccagttcctttcgacgaggataagatcgga
acagagcgtgcatgtttccgggacatgtcctccttcccagagaccaaagcggagaagtac
gtgaaccggatcaagggcaaaaagttcctgcagtacaaccggctccagctgtcgcggatc
taccccaagggccagcgcctggactcctccaactacgaccccttacccatgtggctgtgt
gggagccagctggtggctctcaacttccagactgcagataagcccatgcagatgaaccag
gccctgttcatgctcaacggcaagagtggctatgtcctgcagccgcccatcatgagggac
gacagcttcgacccgttcgaccgcaactctctcaggggcatggaggctatcactctggtc
atcgaggtgttgggggcacgtcacctacccaaacatggcaggggcatcgtgtgtccgcta
atcgagattgaggtgtgtgccgcagattacgacagtgccaagctgaagactgactcagaa
gctgacaacggcctcaacccgacctggccacgcaagtccttccgcttcagcgtctgcaac
cctgcgttcgccttcctgcgcttcggcgtgtacgagatcgacatgttcagcgaccagaac
ttcctcgcccaggccaccttccccatcaatggcctccagacaggctacaggtcggtcccc
ctgaagaacagctacaatgaggatctggagctggcgtctctgcttgttcacatggagatc
gtcagaggaaggacccatgagaatggggagaccagtccgttcctgacgccctcgtccgtg
gggctgggcagctatgtgggccgtgagcggatgggcgagtccggctccgtgtcttcggcc
tcctccatgtcacctctgccgtcgtcccctggccaggcgctgggctaccgggcccgagag
aactctttcgaggcgcgctaccagcccccactggacgaattcagagtgtccccgcaagac
gcgctgctagaccatgtggacccacagaaccggaggccgatgcggaggacccgagtgggc
ggggagaatcgggtctag
DBGET
integrated database retrieval system
