Clupea harengus (Atlantic herring): 122133181
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Entry
122133181 CDS
T09045
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1 homolog
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122133181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
122133181
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
char04054
]
122133181
Membrane trafficking [BR:
char04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
122133181
Pattern recognition receptors [BR:
char04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122133181
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FIIND
UPA-FIIND
CARD
HSR
Motif
Other DBs
NCBI-GeneID:
122133181
NCBI-ProteinID:
XP_042564717
UniProt:
A0A8M1KLG8
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All DBs
Position
9:complement(29660976..29677465)
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AA seq
369 aa
AA seq
DB search
MQSRPAGPLMDISLMSGELEEIHLPHFLCLGGCEASVRDAVRVLHGRDSGVCVEVCELTR
RHARLAHPSFSPLGVVYYLKSLLFPMTVHSKVLVYQSSRSPLVFHAYLLPEDARLKELVE
RDEEKLGGVWRANPQPVRPLQMDGFYSLRTDYCPSKIYPEELMLRYSKTTPNFFKVKLSH
DASFHMVLFSSADSRGQSVWTAEFQSGDDGDARPLPGSRGRTRGAPTEGQNSSQTVAPSV
SHNQVQRDVNITTHIHVQPSPAVNTDRDYLQPSRSPGQDGIQEAAGFVDEKRAELISRVT
EVMPIADELLDQRVIVRETYSNIQAAPTSEDKMRVLYEGLHSAGAQGKLAFYRILQAQQR
LLVEDLWTA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccagaccagctggtcctctgatggatatcagcctcatgtcaggagagctggag
gagatccatctgccacatttcctgtgtttggggggttgtgaggcgtctgtgcgtgatgct
gtgagagtcctgcatgggcgggacagcggagtgtgtgtggaggtgtgtgagctgacccga
cgccatgccaggcttgcccacccctccttctctcctcttggagtggtctactatttaaaa
tctctgctgtttcccatgacagtccattcaaaagtgctggtctatcagagcagcaggtca
cccctggttttccacgcctacctcctgcctgaagatgcccgtctgaaggagctggtggag
agagatgaggagaagttagggggggtttggagggcaaatccccagcctgtcaggcctctt
cagatggacggcttctatagcctaaggactgactactgtccctctaagatctacccagag
gagctgatgctgagatacagcaaaaccacccccaacttcttcaaggtgaagctttcacat
gatgcctcctttcacatggtgttgttcagctctgcagacagcagggggcagtctgtgtgg
acagcagagttccaatcaggtgatgacggagatgccagaccactaccagggagtcgggga
aggaccagaggcgctcccactgaaggtcagaacagcagtcaaactgtggctccttcagtg
tctcataaccaagtccagagagacgtgaacatcacaactcatattcacgtccaaccatca
ccagcagtcaacacagacagggactacttgcagcccagcaggagcccaggacaggacggc
atccaggaggcagctggctttgtggacgagaagagggcagagctcatcagcagggtgaca
gaggtgatgcccatagccgacgagctcctcgaccagagagtcatcgtccgggagacctac
tctaacatccaagctgctcccaccagtgaggacaaaatgagggtcctttatgagggcctt
cactcagctggagctcagggcaaactggccttctacaggatccttcaggcacagcagcgc
ctcctagtggaggatctgtggacagcgtga
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