Clupea harengus (Atlantic herring): 122133303
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Entry
122133303 CDS
T09045
Name
(RefSeq) uncharacterized protein LOC122133303
KO
K04359
platelet-derived growth factor subunit A
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04020
Calcium signaling pathway
char04510
Focal adhesion
char04540
Gap junction
char04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122133303
04020 Calcium signaling pathway
122133303
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122133303
04540 Gap junction
122133303
09142 Cell motility
04810 Regulation of actin cytoskeleton
122133303
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
char04052
]
122133303
00536 Glycosaminoglycan binding proteins [BR:
char00536
]
122133303
Cytokines and neuropeptides [BR:
char04052
]
Cytokines
Growth factors (RTK binding)
122133303
Glycosaminoglycan binding proteins [BR:
char00536
]
Heparan sulfate / Heparin
Growth factors/receptors
122133303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF_N
PDGF
SAM_EPH
KH_PARP14_8
Motif
Other DBs
NCBI-GeneID:
122133303
NCBI-ProteinID:
XP_042565151
UniProt:
A0A8M1KM71
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All DBs
Position
1:4092721..4118009
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AA seq
299 aa
AA seq
DB search
MRTALFYFLLCTSYLLLINAEDLPQELIERLSHSEINSISDLQRLLDIDFVGTGNEVIEE
HKQKQHKQNYSHAYSDLKSSQVHRRRKRSVEEAVPAVCRTRTVIYEIPRSQVDPTAANFL
IWPPCVEVKRCTGCCNTSNMRCHPSRKHHRTVKIARDLLTPNANSNRPQPMAPAGGAKRR
EKEIAELVSLSFVDPPGRGKEFKANDEHAHSHENKWMETKVPRAFGAGPRGGHGRPLPPE
EGMDARCPPEEGMDARCQRLFRASFHHTNQTSPRDASCVWVLLENQGSEREVPEGPVQL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccgcacttttctacttcctgctctgtacgtcgtacctgctgctcattaatgcc
gaggaccttccacaagagctgattgagcgactgtcccacagtgaaatcaacagcatcagc
gacctccagcggcttctggacatagacttcgtaggtacgggaaatgaagtcatcgaggag
cacaagcagaagcagcacaagcagaactattcccacgcctactcggacctgaagagctcg
caggtccaccgcagacgcaagaggagtgtggaggaagccgtgccggcggtttgcaggacg
cggacggtgatctacgagatcccgcgcagtcaggtggatcccaccgccgccaacttcctg
atctggcctccctgcgtggaggtgaagcgctgcacgggatgctgcaacaccagcaacatg
cgctgccacccctcacgcaaacaccaccgcaccgttaagatagccagagatctgctgaca
ccgaacgccaacagcaaccgccctcagccaatggcaccagcagggggggcgaagcgaaga
gagaaggagatcgcagagctagttagtttgtcgtttgtagacccccccggcagaggaaaa
gagttcaaggcgaacgacgaacacgcccattcccatgagaacaagtggatggagacgaag
gtgccgagggcctttggggccggaccccgaggagggcatggacgcccgctgccccctgag
gagggcatggacgcccgctgcccccccgaggagggcatggacgcccgctgccagaggctc
ttcagggcctcattccaccacaccaaccaaacatctccccgagacgccagctgtgtttgg
gttctcctggagaatcagggctcggagcgagaggttcctgagggtcctgtgcagttgtga
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