Chitinophaga agri: GWR21_10425
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Entry
GWR21_10425 CDS
T06416
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
chih
Chitinophaga agri
Pathway
chih01501
beta-Lactam resistance
chih02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GWR21_10425
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GWR21_10425
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chih02000
]
GWR21_10425
01504 Antimicrobial resistance genes [BR:
chih01504
]
GWR21_10425
Transporters [BR:
chih02000
]
Other transporters
Pores ion channels [TC:
1
]
GWR21_10425
Antimicrobial resistance genes [BR:
chih01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GWR21_10425
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
GWR21_10425
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
GWR21_10425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
COG6_N
Motif
Other DBs
NCBI-ProteinID:
QHS59994
UniProt:
A0A6B9ZF93
LinkDB
All DBs
Position
complement(2687926..2689329)
Genome browser
AA seq
467 aa
AA seq
DB search
MNRYLYIIGLAAVTATSCKVGKEYTRPSVDMPAQFRGQSAADTNNIAALPVQSFIKDAAL
LRLIDSAIAKNFDAQIALRNIESAGASLKSARLGRLPDLSLQVQGTRNWPSKNSLNGSLS
EQFIGTRYMDDYNAGLSLSWEVIAWGKISRLKEASLATYLQSTEAAKAVRTRVVSDVAQA
YYNLLMLDTQREVAYRNMQLTDSTLRIIRLQYNSGMVTNLAIEQTEAQLRVAKALIPQIE
QQIAVQEHALKMLTGEMPGTIVRNKLQDIVTDTLLSAGVPATLLSRRPDVLAAEMAVKTA
NARAGIAEAAMYPALNITAGVGVNSFKINNWLNIPGSLFETVGGSITQPVFRRRQLRTEW
ETAKIEWEKSAIEFRRSVVTAVQEVSDALAKMDKLKEQYTFTQQRVDRLEIATHDASLLF
QNGMANYLEVITAQSNALQSELDLAAVKRDQLNAAIDLYRALGGGWK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaacagatacttatatatcataggtcttgcggctgtcaccgctacctcctgtaaggta
gggaaggagtataccagaccatcggtggatatgcctgcgcagtttcgcggacaatcagct
gccgatacgaacaacatcgccgcactgcctgtacagtcgttcattaaggacgctgcgctc
ctcagactgatcgacagtgccattgcgaagaactttgatgcacagatcgcactcaggaac
atcgagtctgccggtgcttctctgaaatcagcccgcctgggccgcctccctgacctgagc
ctgcaggtacagggtacgcgtaactggccttctaaaaacagtttgaacggctccctgtca
gaacagttcatcggtacccgttacatggatgactacaacgccggtctttccctgtcatgg
gaggtgatcgcctggggtaagatcagccggttaaaagaagcttccctggcaacttacctg
caatctaccgaagcggccaaagcggtgaggacacgcgtggtaagcgatgtcgcacaggcc
tactataatcttctcatgctggatacacagcgtgaagtggcctaccggaacatgcagctg
accgatagtaccctgcgtattatccggttgcaatacaattcaggtatggtaaccaacctg
gccatcgaacagaccgaggcccagctccgtgtagcgaaggcgcttattccgcagatagaa
cagcagatcgctgtacaggagcatgcgttgaagatgctgacgggtgagatgcccggcacg
atcgtcaggaataagctccaggatatcgtgactgacaccttgttatctgccggtgttcca
gccacgctgctctcgcgcaggccagatgtgctagcggcagagatggcggttaaaacagcc
aacgctcgtgccggcattgcggaagctgccatgtatccggcgctgaacattaccgcaggc
gtaggcgtaaattcatttaagatcaataactggttaaatattccgggcagcctttttgaa
acagtaggcggcagtatcacccaacctgtattcagacgcaggcaattaagaacagaatgg
gaaacagctaagatagaatgggaaaagagtgcgattgagtttaggcgctccgtcgttact
gctgtacaggaagtgagtgatgcgctggcaaaaatggacaagctgaaagagcagtacact
tttacacagcaacgtgtcgacagattggaaattgctacgcacgatgccagcctgctgttt
caaaacggtatggccaactacctggaagtgatcacggcgcagagtaatgccctgcaaagt
gaactggacctagctgccgttaaacgcgatcagctcaatgcagccatcgatctctaccgc
gcgttaggcggcggttggaaatag
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