Chitinophaga agri: GWR21_18430
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Entry
GWR21_18430 CDS
T06416
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
chih
Chitinophaga agri
Pathway
chih01501
beta-Lactam resistance
chih01503
Cationic antimicrobial peptide (CAMP) resistance
chih02020
Two-component system
chih03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GWR21_18430
09132 Signal transduction
02020 Two-component system
GWR21_18430
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GWR21_18430
01503 Cationic antimicrobial peptide (CAMP) resistance
GWR21_18430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chih02000
]
GWR21_18430
02044 Secretion system [BR:
chih02044
]
GWR21_18430
01504 Antimicrobial resistance genes [BR:
chih01504
]
GWR21_18430
Transporters [BR:
chih02000
]
Other transporters
Pores ion channels [TC:
1
]
GWR21_18430
Secretion system [BR:
chih02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
GWR21_18430
RTX toxin transporter
GWR21_18430
Multiple protein transporter
GWR21_18430
RaxAB-RaxC type I secretion system protein
GWR21_18430
Antimicrobial resistance genes [BR:
chih01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
GWR21_18430
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
GWR21_18430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF4144
Motif
Other DBs
NCBI-ProteinID:
QHS61502
UniProt:
A0A6B9ZGB2
LinkDB
All DBs
Position
complement(4655775..4657145)
Genome browser
AA seq
456 aa
AA seq
DB search
MKLNSTYRRLWSLVVCVILAIPYTSQAQDKKSLSLKEAITLSIQNSKELKLSKTRIDAAL
ASIKTANNAQLPDVSVSGSYLRINEPNVDLKLKLGGSDSTGSGGGSSPKVNSLAYAMATV
SVPVFSGFIIQSQKESARYLAEAAKLDADKDREAVIQNTINAYSNLYKAQQAVELVRENL
KQQEQRVTDFTNLEKNGIIARNDLLKVQLQQSNVEVSLAEAESNLQLANIAMALLVGLPE
TTTLVADITTFEQAAPGSTKAAAEWEQIALQNRKDAAALTSREKAANAGIKAAKGEYYPS
LGFTAGYAAISVPNALTVTNALNAGIGVKYNLSSFWKSGSKVTEAKVRLQEVQVNEELLA
DNIHLSINKAYQQYLVNQKKIDAYQKAIDQAGENYKIVKNKQENNLATTTDLLEADVANV
QAKLNYAFAKADVVVSYTKLLETAGVLTETGAEAIK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaatagcacatacaggcggttatggtctctggtagtttgcgtaatactggca
attccttatacaagccaggcgcaggacaagaagagcctgtctttgaaagaagccataacg
ctcagtatacagaacagtaaagaacttaaactcagcaaaacaaggatcgacgcagcactc
gcatctataaaaacagctaataatgctcaattaccggatgttagtgtttcaggctcatat
ctcagaatcaacgaaccaaacgtagacctgaaattaaaattaggtggtagcgatagtacc
ggttctggtggcggctcttctccgaaagtaaattccctggcatatgcaatggccactgta
tcagtgcctgttttctcagggttcattattcagagccagaaagaatctgcccgctacctg
gccgaagccgcaaagctggacgccgacaaagaccgcgaagcagttattcagaatacgatc
aatgcttacagcaatctgtataaagcacaacaggcagttgaactggtacgtgaaaacctg
aaacaacaggaacaacgcgtgaccgactttactaatctggaaaagaacggtatcatcgcc
aggaacgacctgttaaaagtacagctgcaacagtctaatgtagaggtttccctggctgaa
gcggaaagcaacctgcaactggccaatattgcaatggcactgctggtaggtttgccggaa
acaactacgctggtagctgatatcaccacattcgaacaggcggctcctggtagtaccaaa
gcggctgctgaatgggaacagatcgcattgcagaaccgtaaagacgctgctgccctgacc
tcccgtgagaaagctgctaacgcaggtattaaagccgctaaaggtgaatattacccttcc
cttggttttaccgcaggttatgctgccatatccgttccaaatgcattgaccgtaaccaat
gcactcaatgcaggtataggtgttaaatataatctttcctctttctggaaatccggttcc
aaggtgaccgaagccaaagtaagactgcaggaagtacaggtaaatgaagaactgcttgcc
gataacattcacctgtctatcaacaaagcatatcagcaatacctggtgaaccagaagaag
atcgatgcttatcagaaagcgatcgaccaggctggtgagaactacaagatagttaagaac
aaacaggagaataatctcgcaacaactactgatctcctcgaagcggatgtagctaacgta
caggcaaaactgaactacgctttcgctaaggctgatgtagtagtgtcttataccaagctg
cttgaaacagctggtgtgctgacagagaccggcgcagaagcaatcaaataa
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