Chitinophaga agri: GWR21_24300
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Entry
GWR21_24300 CDS
T06416
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
chih
Chitinophaga agri
Pathway
chih01501
beta-Lactam resistance
chih01503
Cationic antimicrobial peptide (CAMP) resistance
chih02020
Two-component system
chih03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
chih00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GWR21_24300
09132 Signal transduction
02020 Two-component system
GWR21_24300
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GWR21_24300
01503 Cationic antimicrobial peptide (CAMP) resistance
GWR21_24300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chih02000
]
GWR21_24300
02044 Secretion system [BR:
chih02044
]
GWR21_24300
01504 Antimicrobial resistance genes [BR:
chih01504
]
GWR21_24300
Transporters [BR:
chih02000
]
Other transporters
Pores ion channels [TC:
1
]
GWR21_24300
Secretion system [BR:
chih02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
GWR21_24300
RTX toxin transporter
GWR21_24300
Multiple protein transporter
GWR21_24300
RaxAB-RaxC type I secretion system protein
GWR21_24300
Antimicrobial resistance genes [BR:
chih01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
GWR21_24300
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
GWR21_24300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QHS64084
UniProt:
A0A6B9ZQK0
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All DBs
Position
6043626..6044933
Genome browser
AA seq
435 aa
AA seq
DB search
MLPFMFLTMCVAAQQPHDTSKPLHLTIEQIWEQAELNNKRIAMSRLSVESSEEVWKDAKA
ERLPEINTTGTYARVTNMPVYTDGYFHTPEQFPVLHNFYKVGGEAYFNVYNGNKTNLEIK
KGATEHAIAEEQKNLTVSEVKFNAAVCYLDLARSCQFKELIAKDIADQERQLAHIQELQK
NGVVLKSDVLRATLKLSRQKMGMVQIDNDIAIASQKLALMIGTDEHQLILPDTVFSAALL
PPVTYDEYLAVAEKNAHEYKISAGETELRMLALKQVKATVSPKVGIFADYAFSYPQIQFY
PYEGAAYGLGMYGVKAAFPISSFYHNKHKEKAAKLQLERQEVEHRETGDEVRQQVNEAYL
RYKESLTRIDVAQTNITQATENLRIVNNTYFNQLSLVTDLLDADTQMLQTRFDLVSANIA
ARVRYYQLQKAIGNL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgctaccttttatgtttttgacaatgtgcgtagcggcacaacaacctcacgacacttcg
aaaccgttacatttaactatcgagcaaatctgggaacaggcggaactaaataacaaaagg
atagctatgtcccgcttaagcgtggaaagtagtgaagaagtatggaaagatgcaaaggca
gaacgtttgcctgagatcaatactactggtacttatgcgcgtgtgaccaatatgcctgtt
tacacagacggttactttcatacgcctgaacagtttccggtgctacataacttctacaag
gtaggtggtgaagcctattttaatgtttataatggtaataagacgaatctggagataaag
aagggagcaacagaacatgcgatagcagaagaacagaagaacctgaccgtatcagaagta
aagttcaatgcggcagtgtgttacctggacctggcgcgtagttgtcagtttaaagaacta
atagcgaaggatatagcagatcaggaaagacaactcgcccatatccaggaactacagaaa
aatggcgttgtactgaaaagtgatgtgctcagagcgaccctgaaattgtcccgtcagaag
atgggaatggtgcagatcgataacgacatcgctatcgccagtcagaaactggccctgatg
atcggaaccgatgagcaccagttgatactaccagacacagtcttttcagcagcattgctg
ccgccggttacttatgatgagtatcttgctgtggcagaaaagaatgcgcatgagtataag
atctcagcaggagaaactgagttacggatgctggccctgaaacaggtgaaagcaactgta
tcgcctaaagtgggcatctttgctgactacgctttttcttatccgcagatacagttttac
ccttatgaaggagccgcttatggcctgggtatgtatggtgtaaaagccgctttcccgatc
tcttctttttatcacaataaacataaggagaaagccgctaagctgcaactggaaagacag
gaagtagagcatagggaaacaggagatgaagtaaggcaacaggtgaatgaagcttacctg
cgttataaggaatctctcacccgtattgacgtagctcagacaaatatcactcaggcaaca
gagaatctccggatagtaaacaacacctatttcaaccaactctctctggtgaccgatctg
ctggatgcagatacacaaatgctgcaaacaagatttgacctcgtatcagccaacatcgct
gcccgcgtcaggtattaccagttacaaaaagctataggaaatttataa
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