Chromobacterium phragmitis IIBBL 274-1: DK843_03570
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Entry
DK843_03570 CDS
T05744
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
chrb
Chromobacterium phragmitis IIBBL 274-1
Pathway
chrb01501
beta-Lactam resistance
chrb02024
Quorum sensing
Module
chrb_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
chrb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DK843_03570
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DK843_03570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
chrb02000
]
DK843_03570
01504 Antimicrobial resistance genes [BR:
chrb01504
]
DK843_03570
Transporters [BR:
chrb02000
]
Other transporters
Pores ion channels [TC:
1
]
DK843_03570
Antimicrobial resistance genes [BR:
chrb01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DK843_03570
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DK843_03570
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DK843_03570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
SlyX
Motif
Other DBs
NCBI-ProteinID:
AXE33474
UniProt:
A0A344UDX6
LinkDB
All DBs
Position
792398..793795
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AA seq
465 aa
AA seq
DB search
MKTRTSLTPILAALLAAAALTGCAIGPDYARPKLDIPADFKEDGRWKSAEPQDEAPRGDW
WAAYRDATLNGLMDTLNRQSPTIAQAEAQYRQAQAQLNQAEAGLFPSLSANASQSRAVAA
PGNVAFNNYNLGLAASWEVDLWGGVRRAVEAGEAKQQASAAQLAAIRLSSQAQLATAYLQ
LVAADRQLANLRDSEKALEESLRLTRNQFAAGIVGDDAVASSESQWKTAQAAVVDKRLTR
VQLEHAIAAALGQAPAGFSLPPAEAEPHLPQIPSGLPSTLLERRPDIAQAERNMAVANAQ
IGIAQSAYFPSLTLGASGGYRGSTFADWVTLPNRIWSIGPSLALSLFDAGLRRAQTAQAI
AAYDASVAGYRLTVLAALQGVEDNLSAQSLLHEEAGLQTAALAAAKRAETIAQNQYRAGT
VSYLNVLSAQNARIAAENNLWNVKNRQYASSVALIAALGGGWRAP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaagaacaagcctgacccccatcctggcggcgctgctggccgccgccgcgctg
accggctgcgccatcggccccgattacgccagacccaagctcgacatcccggccgacttt
aaagaggacggccgctggaagagcgccgagccgcaagacgaagcgccgcgcggcgactgg
tgggcggcatatcgggacgccacgctgaacggcctgatggacacgctgaaccggcaaagc
cccaccatcgcccaggccgaagcgcaatatcgccaagcccaggcccagctcaaccaggcc
gaggcgggactgttcccctcgctatccgccaacgcctcgcaaagccgggccgtcgccgcg
cccggaaacgtcgcgttcaacaactacaacctgggactggccgccagctgggaggtggac
ctgtggggcggcgtgcgccgcgcggtggaggccggcgaagccaagcagcaggcctcggcg
gcgcaactggccgccatccgcctcagcagccaggcgcaactggccaccgcctatctgcag
ttggtggcggcggacaggcaactggccaacctgcgcgacagcgaaaaggcgctggaagag
tcgctgcggctgacccgcaaccaattcgccgccggcatcgtcggcgacgacgcggtggcc
tcgtccgaaagccaatggaaaaccgcccaggccgcggtcgtcgacaaacggctgacccgc
gtccagctggagcacgcgatagcggccgcgctcggccaggcgccggcaggcttctcgctg
ccgccggcagaagccgagccccatctgccgcaaattccctccggcctgccctcgacgctg
ctggagcgccgcccggacatcgcgcaggcggagcgcaatatggccgtcgccaacgcccag
atcggcatcgcccaatccgcctatttccccagcctgacgctgggcgccagcggcggctac
cggggctccaccttcgccgactgggtgacgctgcccaaccgcatctggtccatcggccct
tcgctcgcgctgtctctgttcgacgccggcctgcgccgcgcccagaccgcccaagccatc
gccgcgtacgacgccagcgtggccggctaccggctaaccgtgctggccgcgctgcagggg
gtggaggacaatctgtccgcgcaaagcctgctgcatgaagaggccggactgcagacggca
gccctggcggcggccaagcgggccgagaccatcgcccagaaccagtaccgggccggcacc
gtgtcctatctgaacgtgctgagcgcgcaaaacgcccgcatcgccgcggaaaacaatctg
tggaatgtgaaaaaccgccagtacgccagcagcgtggccttgatcgccgcgctgggcggc
ggctggcgcgcgccgtaa
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