Ctenopharyngodon idella (grass carp): 127497916
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Entry
127497916 CDS
T08802
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04622
RIG-I-like receptor signaling pathway
cide04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
127497916
04623 Cytosolic DNA-sensing pathway
127497916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127497916
Enzymes [BR:
cide01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
127497916
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127497916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
LexA_DNA_bind
Motif
Other DBs
NCBI-GeneID:
127497916
NCBI-ProteinID:
XP_051722695
UniProt:
L7RXQ4
LinkDB
All DBs
Position
16:complement(26551474..26569389)
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AA seq
1392 aa
AA seq
DB search
MSRGRGGFNKDCQRSFLPPPQGKPQFHYYTTTGHPRGPRVPSPGSVSGSYQHPSLYSSYP
GAPGVPPHGRPFPPSPSEPPLWASPQHSSDQISDSNGVSFRQHQVQFLRGQSAHAPQFRG
PQQRGSQTSSQGEEVSTGPLHYQTGYRDFKTSGNSFGRRDCYSRGRGNWQREHNFGPKKK
SGWNHPQQKGQYYPNQHTKHYWNTQVDDVSFGLHSLSLGDRITRVDNSDALSCSSSASKV
SSSPDSVRESLYLTPEIQQQVFAFLKSLGPDETVHARALGKKLNLPKTIVNKALYALLRT
NQAVKQGEIPPLWRLCKVEDSEPIKGRDQSLSSKDLEKEPGQSSSINQESREHPTSTGAP
SASQILFEADGNISDQSEDSEGDDTSDTLFPVQDQQILLPAVQLETLSTMAESKDSKEKI
LQYLYEVGTGNALVIAKNLGLRSAKQVNPTLYAMEKQGDVRRNTEVTPPTWALSAHRQEK
MDRQRKVAATARQDVNNAEMLNLAAEGIADETSVKLEADDEFDFGPVPMEGGENPLVDML
DNNNIFGNTELDMPGLEPIPPKPSELSTSTYQPPPHQFSYYQDMASNGGERLQWASDDIP
EFLNTIRSEVAVSLAAPPPPSQSLESSRFQKLKEARSKNPVSGLMEFAQHLGHTCEFLLL
DQSGPSHDPRFRMQVMLDGRRFPPAEGSNKKVAKKDAAATTLRILWREMKGAGGDEEEEP
SFEGAESTTDLAEDMPSGTDTPPQALSRSLPGGKNPVSVLMEHSQRSGNAIQFIKTGQEG
PPHDPRFMFRVKVGDRLFQEASAPSKKAAKQLAAEEAVKELMGDGLLHLNKPPGTFHSLG
DNESQPAIPACPSLPPLTASELQAAHEAGVGDLINHLNNNAVSGLLEYARARGFAAEIRL
VGQSGLSHEPKFTYQAKLGGRWFPAVCASNKKQGKQEAADAALRVLIGEAEKAARTGELT
PELPVSGSTMHDQIAMLSHQRFNALTARIQHSLLGRKILATIVMRNGSDTLGTVVSLGTG
NRCVKGEELSLRGDTVNDCHAEIISRRGFIRFLYGQLMKHWESPGDESIFEVADDGKLKI
KSDITFHLYISTAPCGDGALFDKSCSEAAEENVSGHMPLFENVKQGKLRTKVENGEGTIP
VESSDIVPTWDGIQHGERLRTMSCSDKILRWNVLGLQGALLSHFIHPVYLRSITLGYLYS
HGHLTRAVCCRLARDGDAFKKSLPANFTLNHPEVGRVSVYDSARHTSKTKESSVNWSQPD
QLSVEVLDGTKGKVDSLKMEVSRVSKSNLFRLFQALCQRAGRADLLALPSYAHAKMAATS
FQDAKRLFFLALNQHGYGAWIGKPLEEKSFEGEARGSELRAGSGDVRAPCCAVDPNSCSS
SNNNLQSAAQGF
NT seq
4179 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggtagaggagggtttaacaaagattgtcagcgatccttcctccctccccca
cagggaaaacctcagtttcattactacacaaccactggtcatccacggggccctcgtgtc
ccaagccccggctctgtatctggcagctatcagcacccttctctttactcctcttacccg
ggtgctcctggcgtacctccacatggtcgtccttttccccctagtccctctgaaccaccc
ctgtgggcatccccccagcacagcagtgatcagatctctgactcaaatggtgtaagcttc
cgacaacaccaggtgcagttcctcagggggcagagtgcacacgctccacagttcagagga
ccccaacagcgagggtcccaaacctccagccaaggggaagaggtctcaactgggcctcta
cattaccagacaggttatcgcgacttcaaaacaagcggtaacagttttggaagaagagac
tgctacagcagaggccgaggaaactggcaaagggagcataactttggacctaagaaaaag
tcagggtggaatcaccctcaacagaagggacagtattatccgaatcaacacactaagcat
tactggaatacacaggttgatgatgtgtcctttggccttcatagtctgagtttaggtgac
cggataacaagggtagacaactctgacgctttgtcttgcagtagcagtgccagcaaggtt
tccagttctcccgactcggtcagagagtctctttatttgacccctgagatccagcaacaa
gtctttgcttttttgaagtcactcgggccagacgagaccgttcacgcaagggccttgggc
aaaaagctgaatctccccaagacgattgttaataaggctttatatgccctcttaaggaca
aaccaagcggtgaagcaaggtgagattcctcctctgtggagactctgtaaggtagaggac
agtgagcccatcaaagggagagaccaatcgctgtcttcaaaggatttggagaaagagcca
ggtcagagttcatccataaaccaagagtctagagagcatcccaccagcaccggcgctccc
tctgcatcccagatcctctttgaggctgacggcaatatcagtgaccaatcagaggattct
gaaggtgacgatacctctgacacgttgtttcctgtccaggatcaacagattcttttacct
gcagtgcagttggaaaccttgtcaacaatggccgagtctaaagatagcaaagagaagatc
ctacagtacctctatgaagtgggtacgggtaatgcgcttgtgatcgccaagaacctcggc
ctgcgcagtgccaagcaggttaatcccacactctatgccatggagaaacaaggtgatgta
aggcgcaacaccgaagttactccacctacctgggcacttagtgcgcaccggcaggaaaag
atggaccgccaacgtaaagttgctgcgactgcaagacaggacgtgaacaatgctgagatg
ttgaacttggcagctgaagggattgcagacgaaacttcggtcaagttggaagcagacgat
gaatttgattttggaccagttccgatggaagggggtgaaaatccattggtggacatgtta
gacaacaacaacatttttggtaacacagagcttgatatgcctggccttgagccaataccc
cccaaacccagtgagctttccacctccacctaccaacctcctccccatcagttctcatac
tatcaggatatggccagtaatggaggagaacgtttacagtgggcatctgatgatattcca
gaattcctgaacacgatccgctccgaggtcgctgtttcattagctgctccccctccccca
tcccaaagcctggagtcaagcagattccagaaactgaaagaggcccgtagtaagaaccca
gttagtgggctgatggagtttgctcagcatcttggacacacttgtgaattcctacttctg
gaccagtctggaccctcacatgacccccggttccggatgcaggtcatgttagatggccgc
aggtttccaccagctgagggttcaaacaaaaaagtggccaaaaaagatgctgcagccaca
accctgaggattctttggagggagatgaagggagcaggtggagatgaagaggaagaaccg
agctttgagggagctgagtcaactactgacctggcagaagatatgccaagtggcacagat
actccgccccaggctctgtctcggtctctacctggaggaaaaaatcctgtttctgtcctg
atggagcacagtcagcgcagtgggaatgccatccagtttatcaagacaggacaggaaggg
cctccccatgatccacggtttatgttccgtgtaaaggttggggaccgtctcttccaagaa
gcctcagcacccagtaagaaagcagcgaagcagctggcagcagaggaggctgtgaaagag
ctaatgggagatggactactacatcttaacaagcctccaggtactttccattctctgggc
gacaacgagtctcagccagcgattcctgcatgcccctcgctacccccactgacggcatct
gagctccaggcggcccatgaagcaggtgtgggtgacctcatcaaccacctgaacaacaac
gcagtgtccggcctcctcgagtacgcccgtgctcgaggctttgctgctgaaatccgcctg
gtgggccagtccggactctcacacgagcccaagtttacataccaggctaaactgggaggg
cggtggtttcctgcagtgtgtgctagtaataagaagcaggggaagcaggaggcagcggat
gctgcactacgagtgctcatcggagaagcagagaaagcagcacgtactggagagctcacg
ccagagttgccggtatcaggcagtacgatgcatgatcagatcgccatgctaagccatcag
cgctttaatgcactcacagcacgcatccagcacagccttctgggtaggaagattcttgct
accatcgttatgagaaatggatcagatactcttggaacagttgtcagccttgggacagga
aaccgctgtgttaagggagaggagcttagtcttcgaggggacaccgttaatgactgccat
gcagaaatcatctccaggagaggctttatccggtttttgtacggtcagctgatgaagcat
tgggaaagccctggtgatgagagtatttttgaggttgcagacgatggtaagctgaagatc
aaatctgacatcacctttcatctctatattagcactgctccatgtggcgatggcgctctg
ttcgataagtcgtgcagcgaggccgctgaagaaaatgtgtctggacacatgcctctcttc
gagaacgtaaaacagggcaagctcagaaccaaggtggagaacggtgaaggcaccatccca
gtggagtccagtgatattgtgcccacctgggatggcattcagcatggtgagcgcctgagg
accatgagctgcagtgacaagatcctgcgctggaatgtgctcggcctacagggggcgctc
cttagccacttcatccaccccgtttatttgcgctccatcactcttgggtatctctacagc
catggtcacctgactcgagctgtatgttgccgattggctagagatggtgatgcattcaaa
aagagtttaccagcaaacttcactctcaaccaccctgaggtgggacgggtgagtgtgtat
gactccgcacgccacacaagtaagaccaaagagtccagcgttaactggagtcagccagac
cagctcagcgttgaggtactggatggcaccaagggcaaagtggacagtctcaagatggag
gtatcacgggtttccaagtccaatctgttccgtctcttccaagctttgtgccagcgtgcg
ggccgagccgatctgctggcactgccgtcctatgcccacgctaagatggctgccacttca
ttccaggatgccaagaggctgttcttcctggcgctgaaccaacatggatatggcgcctgg
atcgggaagcccttggaagaaaaaagttttgagggagaagccagaggctccgagctaagg
gcaggaagcggggacgttcgtgctccgtgttgcgcagttgaccccaatagctgctcgagc
tcaaacaacaatttacagtctgcagcacagggcttttag
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integrated database retrieval system
