Ciona intestinalis (yellow sea squirt): 100176235
Help
Entry
100176235 CDS
T01056
Name
(RefSeq) exostosin-2-like
KO
K02367
glucuronyl/N-acetylglucosaminyl transferase EXT2 [EC:
2.4.1.224
2.4.1.225
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
cin01100
Metabolic pathways
Module
cin_M00059
Glycosaminoglycan biosynthesis, heparan sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
100176235
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
100176235
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.224 glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase
100176235
2.4.1.225 N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase
100176235
Glycosyltransferases [BR:
cin01003
]
Glycan extension
O-Glycan
100176235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_64
Exostosin_GT47
Motif
Other DBs
NCBI-GeneID:
100176235
NCBI-ProteinID:
XP_002119284
Ensembl:
ENSCING00000023395
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MSVKLKPVHHKVILVLLLLSGVALIFKFNWNYQSKSREEFRMETLHINSAHDLPVTQISL
DGIQPSDKADLNCKMYNCFDIYRCGSDENHPNKMKVFLHPLSQYTDESGASITPSLSKEF
VEMYYAIAQSDYYTGDPDNACIFIPPVDMLNQNRLNVQKVGQLLTKLPHWTRGTNNLIFN
FLPGNSPDYSTAIEVPHNKAIIAGGGFSHWTYRSTFDVSIPVYSPLVKGVKLQQETDGLI
RKWLLISSQTNIHPEFRQELETLASSSSDFLLLDKCRNVPEDVPLQFTRCKNDEQKKYPE
ILQEGTFCLLLPTSRLGQSALMESMQAGCIPVFACDTYILPFSEVLDWSRASVLIREDSL
PDIMNILRRIPHEQVVLMKKQVEFLYTSYFTNIPAITMTTLQIINDRVFPHVATTYEKWN
NPPSSNSVQSPLFLPLISPKEDGFTAVILAYDRVLSLFQLIKSIDKVPSLRMILVVWNNQ
HKAFPARNEWPIIEHEWKVIQTSSNELSNRFFPYNEIKTEGVLAIDDDIIMLTTDEIEFG
FQVWREFNDRIVGFPPRLHIWGDDGKMRYVSDWTNDISIVLTGAAFYHNYYNYLYTYKMP
GGIKDWVDNHMNCEDIAMNFLVSNYSGKAPIKVTPRKKFKCAECATGGSLSLDETHMVER
STCMNHFASIYGVSSLKAINFRADPVLFMDKLPEKRKHYPDIGSL
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttaagttaaagcctgttcatcataaagtaattttagttctacttcttttatct
ggtgttgccctaatttttaaattcaattggaactatcagtcaaaatcaagggaagaattt
cgtatggaaacactgcacatcaactctgctcatgatttacctgtcacacaaatttcatta
gatggtatccagcccagtgacaaagcagatctgaattgcaaaatgtacaattgctttgat
atttaccgatgtggatctgatgaaaatcatccaaacaagatgaaagtcttccttcatccg
ttatctcaatacacagatgaatctggtgcttcaattactccttcattatccaaggaattt
gttgaaatgtattacgcaattgcacaaagtgattattatactggagatcctgataatgct
tgcatattcattccacctgttgatatgcttaaccaaaaccgtttaaacgtacaaaaagtt
ggacaattactgaccaaactcccgcattggacccgtggaaccaacaaccttatatttaac
tttttacccggcaattccccggactacagcacagctatagaggtcccacataataaagca
ataattgctggcggtggtttttcgcactggacgtataggtcaacatttgatgttagtatc
ccagtatacagcccattggtgaaaggtgttaaactgcagcaggaaactgatggtttaatt
agaaagtggcttctaatatcttcacaaactaatatacatcctgagttcagacaagaatta
gaaacccttgcatcttcaagttcggacttcctcctcctcgataaatgtaggaatgttcca
gaggatgttcctcttcaatttacaagatgcaagaatgacgaacaaaagaaatatccggag
attttacaagaaggaacattttgtctccttcttcctacatcccgtctcggacagagtgct
ctcatggagtcgatgcaagcgggatgtattcctgtcttcgcttgcgatacctacatcctc
ccattctctgaagtccttgactggagcagagcatccgttcttatcagggaagattctctt
ccggacatcatgaacattttaaggaggatcccgcatgaacaagttgtgctgatgaagaaa
caggttgaattcttgtacacaagttacttcacgaacatcccagccatcaccatgacgact
ctacaaatcataaacgaccgtgtttttcctcacgtggcgactacttacgaaaaatggaat
aatcctccatcatcaaacagcgttcaatctccactattcctcccactaatatcacccaaa
gaagacgggtttacagccgtgatattagcttacgatcgtgtgttgagtttatttcaactg
ataaagtccattgacaaagttccaagtttacggatgatattagttgtttggaacaaccag
cataaggcattccctgcaagaaacgaatggcccattattgaacatgagtggaaagtcatt
caaacaagctcaaatgaattaagtaacaggttcttcccctataatgagataaagacggag
ggtgttcttgcgatcgatgatgacatcataatgctcactacagatgaaatcgagtttggt
ttccaggtatggagagaatttaacgatcgaatcgttggttttccaccaagacttcatatt
tggggtgatgacgggaaaatgagatatgtttctgattggacgaatgatatttctattgtg
ctcactggtgctgcgttctaccacaactattataactacctctatacttacaagatgcca
ggtggtataaaagactgggttgacaaccacatgaattgtgaagatattgccatgaatttt
ctcgttagtaactattcaggaaaagcacccattaaagttactcctcgtaagaaattcaag
tgtgctgaatgcgctactgggggtagcctttcactcgatgaaacacacatggtggaaaga
tctacttgtatgaaccactttgcttcaatatatggtgtttcgtctctcaaggcaataaac
ttccgtgcagaccccgtactttttatggacaaacttccggaaaagcgaaaacattaccct
gatattggctcactttga
DBGET
integrated database retrieval system
