Ciona intestinalis (yellow sea squirt): 100176411
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Entry
100176411 CDS
T01056
Name
(RefSeq) allene oxide synthase-lipoxygenase protein
KO
K00461
arachidonate 5-lipoxygenase [EC:
1.13.11.34
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00590
Arachidonic acid metabolism
cin01100
Metabolic pathways
cin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00590 Arachidonic acid metabolism
100176411
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100176411
Enzymes [BR:
cin01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.34 arachidonate 5-lipoxygenase
100176411
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GFIT
Motif
Pfam:
Lipoxygenase
PLAT
Motif
Other DBs
NCBI-GeneID:
100176411
NCBI-ProteinID:
XP_002130523
Ensembl:
ENSCING00000001701
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Position
12:complement(620822..629424)
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AA seq
677 aa
AA seq
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METYKLIITTNDRYLGAGTDATVCVKITGVTGNDTKWTDLDHFFQDDFERGKAELYTVEH
EGDTVGEPVVVQLKLTGILESDGWLCDDVIVEYNGHRYEFPVFDWIEGGEVAVTRGEATL
PQNVTHPQCRELRSKEVENNLKKFEWQPPAVSDKELSWGVNRYMKAAHYFELPSILRRTQ
GKLESMAGSGLTVALNAGKNLFNNLFSNLKTLDDYRELYSKTGFGDPEFIDDWKTDKEFG
RQVLTGISPLAFERCTKIPNGCDVTNEHVCGLLAEGKTLESEIKAGKIYIADYSHTYDVE
RNDIPGSNKKFVCADCRAIFYVNPQGDFLPIAIQLCPNDEETVHTPLGNEHDWLLAKMYF
RASVRSTHEWIYHYLQTHAASETFCIAMFRNLPRNHPMYKLLRQHVRTAPAINTDARVLL
VPNGSLANKSNHLNAPSSVRKSYKTFNLNQLDIPACLKRKGLDDPNLLPNFHYRDDALDV
WKAMEQYVANVVNHHYTCDKDIKEDYELQSFMFDVAHEGFGWQDNDLRGFPDKLNTRYEL
IHMATIIIFASSAQHAAVNFGQMETYRFIPNAPGSMILPPHKRGEADEQRVMDSLPGVVV
SSILISFSFALSEYAKDELFLGDVPDRLFTDPKVIEMQVNFKQELSKLQTKFEERNKKLK
YAYTYLLPDKIPISIAI
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggagacttataagcttataataacgaccaacgatagatacctgggcgcaggcacagac
gccaccgtgtgtgtaaaaattaccggggtgaccggcaacgacaccaagtggacagatctt
gatcatttcttccaagatgatttcgagcgtggaaaagctgagttgtatacggttgagcat
gaaggggacacggtgggcgaacctgtggtcgtgcaactaaaattaacgggaattctagaa
tctgatggttggttatgcgatgatgtcatagtggaatacaatggacatcgatatgagttc
ccggtgtttgattggatagaagggggagaggtcgctgtaacaaggggagaggctactttg
ccacaaaatgtcacccaccctcaatgccgcgaacttcgctcaaaagaagttgaaaataat
ttgaagaagtttgaatggcagccacctgctgtgtcggacaaggagttgagttggggggtg
aaccgttacatgaaagccgcacattactttgaacttccaagcattttaaggagaacacaa
ggaaagcttgaatccatggcaggctcgggtttaacagttgctttgaatgctgggaagaat
ttgttcaataacttgttcagcaacctgaaaactctggatgattaccgcgaactttacagt
aagactgggtttggagatccagagtttattgatgactggaaaaccgacaaggaatttggt
aggcaggtcctaacagggatttccccccttgcttttgaaagatgcaccaagatacctaat
ggttgtgatgtcacaaatgaacacgtgtgtggtttgttggctgaaggaaagacattggaa
agtgaaataaaagcgggaaaaatttacatcgctgattattcccacacgtacgatgtggaa
agaaatgacattccagggtcgaacaaaaagtttgtttgtgctgattgcagggcgatattt
tatgttaacccccagggtgactttctcccaatagcaatccagctttgccccaatgatgag
gaaactgtacacacaccactggggaatgaacacgattggcttcttgcaaagatgtatttt
agagcttctgtgagaagcacacacgagtggatctaccattacctacaaacgcatgccgca
tctgaaacattttgcatcgcgatgtttcgcaacctgccccgaaaccatccgatgtataaa
ttgctccgacagcacgtacgtacagcacctgcgatcaacactgatgcgagggtgttactt
gtgcctaatggatcgctcgcaaacaaatccaatcatctgaatgccccatcatcagtacgg
aaaagctataaaacattcaacttgaatcaacttgacatcccagcttgtcttaaacgtaaa
ggattggacgacccaaaccttcttcccaactttcactacagagatgatgcattggatgtt
tggaaggcaatggagcaatatgttgccaatgtggtcaaccatcattatacttgcgacaag
gacataaaggaggattacgaacttcagagtttcatgttcgacgtagcgcatgagggcttt
ggttggcaggacaatgacttgaggggattccccgacaaactaaacacaagatatgaactg
attcatatggccaccatcatcatatttgcaagcagtgcacaacacgcagctgttaacttt
ggacaaatggagacttatcgtttcattccaaacgcaccaggcagcatgatactaccacct
cataaaaggggagaagcagatgagcaaagggtgatggattctctaccaggagtcgtggtt
tcaagtattcttatcagcttctcatttgctttatcagaatatgcaaaagatgagctattc
cttggtgatgtaccggatagattgtttaccgatccaaaagttattgagatgcaagtcaat
tttaagcaggaactgagtaaacttcaaactaaatttgaagagaggaacaagaaacttaaa
tatgcgtatacttatctattacctgataaaataccaataagcattgctatttaa
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