Ciona intestinalis (yellow sea squirt): 100176744
Help
Entry
100176744 CDS
T01056
Name
(RefSeq) allene oxide synthase-lipoxygenase protein
KO
K00461
arachidonate 5-lipoxygenase [EC:
1.13.11.34
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00590
Arachidonic acid metabolism
cin01100
Metabolic pathways
cin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00590 Arachidonic acid metabolism
100176744
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100176744
Enzymes [BR:
cin01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.34 arachidonate 5-lipoxygenase
100176744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lipoxygenase
PLAT
Motif
Other DBs
NCBI-GeneID:
100176744
NCBI-ProteinID:
XP_002119368
Ensembl:
ENSCING00000024860
LinkDB
All DBs
Position
5:1300354..1305828
Genome browser
AA seq
671 aa
AA seq
DB search
METTLYTIEAKTASEFRVGKTDATVSIKLIGEKGHRSTGWLILDNFWRNDFEFGRTDTFN
VKAVDIGLPSVIRLKLDKVADPYGWHCEMVIVSQGRVKRTFYVYDWVHDVMDVGYGRARL
PQYELDDHVIAIRQTEVERNRAEFRWNIRPTSDDAGWRLPRFADADEYEELPRQFRISDE
QINNFFGQRQIALLNSLMEYASGMLQKRKLTDFDDYKDCFFHPSLPNDIPPFCDKWSTDE
ELARQILNGVNPTSLEKCTELPTGFVPTKFECGDEIQDQIQKGRVFIVNYAKFTTEGRRN
RTKKGDRLYAGDPIMILLVGNDSKLRPVAIQLEEDGHVFTPRDSYYDWLLAKLYFRCCDV
NVHEWKYHFLRTHASMEPFAVAVFRSFSRRHPLYKLLRPHVHTVPAINTIARKNLLGPTA
ATNCFLSLNGLDMARKAFQDLRFKNLHILSVFEQQGTDDKEVLSEYFYRDDALLLWKAIQ
NYVTSVISIFYSEDQDVANDWELDSFVRMVATEGFGYDGCDRGFPLKLESIDKLVDYMTL
IVFNCSVQHAASNFGQFEIYKFIPNAPGGMRLPPHKKGEGSMQRIMDSLPDNVMASLQLG
TAFLLSTYAPNEVYLGQFPMNLFDDARVDQAQAQFRGELKTISNLIHSRNKDLKFPYEYL
LPEKIPISIAV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggaaactacactttacaccatagaggcaaagactgccagtgagttcagagttggtaaa
actgacgcaacagtctcgataaaacttatcggcgagaaaggacaccgaagtactgggtgg
ttgattctggataatttctggcgtaatgactttgaatttggtcgaacggatacatttaat
gtcaaagctgtggacattggtttacccagcgttatcagactcaagttggacaaagtcgca
gatccttacggctggcattgtgaaatggttatagtatctcaagggcgagtaaaacgaacg
ttctacgtttacgattgggttcatgatgtaatggatgtcggctacggtagagctcgacta
cctcaatatgagttggatgatcacgtgatcgcgataaggcagacggaagtggagcgaaac
cgtgccgagtttcgttggaacattcggccaacaagtgatgacgcagggtggagacttccc
aggtttgcagacgcggatgaatatgaggagctaccacgtcagttccggattagtgatgaa
caaataaacaactttttcggccagcgacaaattgcgttgcttaatagcctcatggaatat
gcatcaggaatgctacagaagaggaaattgaccgattttgatgattacaaagattgtttc
tttcatccaagcttgccgaatgacattccaccgttttgcgacaagtggtcaacagacgaa
gaattggcacgacaaattttaaatggagtgaacccgacttctttggaaaagtgcaccgag
ttaccgactggttttgttccaaccaaatttgaatgtggtgacgaaatacaagatcaaata
caaaaaggaagagtgtttattgtcaactatgccaaattcaccacggaagggcgccgtaac
cgcacgaagaaaggggaccgactttatgccggagacccaatcatgattctgttggttgga
aacgattcgaagctccgccctgtagctattcaattggaagaggacggtcacgtgtttaca
ccacgtgactcgtattatgattggctcttagcgaaactctacttccggtgctgtgacgtt
aacgtgcatgagtggaaatatcacttcctacgaacgcacgcttctatggagccttttgct
gtggcagttttccgttccttctcacgacgtcacccattgtacaagttgttgcgtccccat
gtacacaccgtccctgcaattaacacaatcgctaggaagaatctgcttggaccaacggca
gctaccaactgtttcctttctctaaatggactagacatggctcgaaaagcattccaagat
cttcgctttaagaacctgcacattttgagcgtgtttgagcagcaaggtacagatgataag
gaagttctgtctgaatatttctacagagatgatgcgcttctactgtggaaggcaatacaa
aactacgtcacgtccgttatttcaattttttattcagaagaccaagatgtggccaatgat
tgggagcttgatagttttgttcgcatggtggcaacagagggtttcggatacgacgggtgc
gacaggggattccctctgaaactagaatcgattgataaattggtagattacatgacgttg
atcgtgtttaattgttcggtacaacatgcagcgagcaactttggtcaattcgagatttac
aagtttattccaaacgcaccgggtggaatgagacttccaccgcataagaaaggcgagggc
tcgatgcaacggattatggacagtctcccggacaacgttatggcaagcttacaacttggc
acagcgttcctgctatcgacctatgctccgaatgaagtatacttgggtcaattcccaatg
aatctgttcgacgacgcgagggtcgatcaagcccaagcccagttcagaggagaattgaaa
acaatctcaaacctgattcattcaagaaacaaagatcttaagtttccttacgagtatctt
ctgcccgagaaaattccaatcagtatcgctgtgtga
DBGET
integrated database retrieval system
