Ciona intestinalis (yellow sea squirt): 100178342
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Entry
100178342 CDS
T01056
Name
(RefSeq) arachidonate 5-lipoxygenase isoform X1
KO
K00461
arachidonate 5-lipoxygenase [EC:
1.13.11.34
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00590
Arachidonic acid metabolism
cin01100
Metabolic pathways
cin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00590 Arachidonic acid metabolism
100178342
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100178342
Enzymes [BR:
cin01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.34 arachidonate 5-lipoxygenase
100178342
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Gene cluster
GFIT
Motif
Pfam:
Lipoxygenase
PLAT
Motif
Other DBs
NCBI-GeneID:
100178342
NCBI-ProteinID:
XP_018669787
Ensembl:
ENSCING00000014085
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Position
12:complement(4054907..4064416)
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AA seq
676 aa
AA seq
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MEEYVLNIKTSNRFLTAGTLCGVHVRITGRNGTTSDWTQVDTAASYLRTVKRGSTVQHVL
RHDGEDLGPPIVVGLKLSTMAIDIWYCDEITIEYENKNYEFPVYDWVEADELSVTSGEGK
LPQNETSDVIKRLRKHEVTSNIGKFQWCVPTSNDLSWGMPRHINAETFVDLPRTFSRNYD
KLRSIGTSGLTVAYNATANLLRGLFWNLNTLDDYRRLYTHLGNSDPCFIDDWTQDEEFGR
QVLTGVSPLVVKRCVTLPEYCNVTDSDVIKELPTDCSLDEEIKGGRIFIVDLTYTKNVER
NVDSKTGEPFVCADCLALFRVNDAGKFVPIAIQLTPDDPESIFTPSDKYYDWLLAKIYFR
ATLQSSHEWHYHFLNTHGVSETFSVATLRCFPRCHPVFKLLQPHLKTVPNINTDARVLVI
PPKSLVNKSNHLSGSSFIRECFKTFDISQLDIPSMIRKNGTDDCGDLPNYHYRDDAIKIW
NVIQDYVSDVIRYYYWSDKDIVNDYELQGWAHDVAVEGFGWQDGNTRGAPENIVSVEQLV
WYCTLIIFTSSAQHSAVNFGQRETYKFIPNAPGCMVLPVHKRGEGSLERIMSSLPGIRVS
SLIISFAYSLSEFTQNEIYLGDFPERLFSEEEVLEFQFLFKRKLDKLATELKRRNQDLKY
PYIDLMPGRIPISISI
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatacgtattgaatataaagacttccaatcgtttcctgacggctggtacttta
tgtggggttcatgtacgtatcacgggtcgcaatggaacaacatcggattggacacaagta
gacacggcggcttcatatctaagaacggtgaaacggggttccactgtacaacatgtgttg
cgtcatgatggagaagatctcggaccaccgatcgtcgtcggattaaagctttccacgatg
gcgatcgacatttggtattgtgacgaaataacaatcgaatacgagaataaaaattacgag
tttccggtttacgattgggtagaggcggacgagctttctgtgacgtcaggagaaggtaaa
ctgccccaaaacgagaccagtgacgtcatcaagagattacgcaagcacgaagtgacgtca
aacattggcaagtttcaatggtgcgtcccaacctcaaatgaccttagttggggaatgcct
cgacatataaacgccgaaacttttgtggatctgccgcgaacttttagcagaaattacgac
aagcttcgtagcattggaacctcggggctcactgtggcttataacgcgacagctaattta
ttaagaggtctgttttggaatctaaacacactggacgactacagacgcctctacacacat
cttggaaacagcgacccttgctttatagacgattggactcaagacgaagaatttggacgt
caggttctaacaggggtttcccctcttgtagtgaaacgctgcgtcacgttacctgaatac
tgcaacgtcaccgacagtgatgtcatcaaggaactaccaaccgattgtagtttagatgaa
gaaataaagggcggccgtatatttattgtcgatctaacttacacgaaaaacgtcgaacgg
aatgttgattcaaaaactggcgaaccgttcgtgtgtgctgattgtcttgcattgtttcgt
gtgaatgacgctggaaagtttgtcccaatagcgatccaacttaccccagatgatccggag
tctattttcactccgtctgataaatattacgattggttgttggctaaaatttacttccgg
gctactttacaaagttcccacgagtggcattatcatttccttaacacgcatggagtttcg
gaaactttcagcgtggcaacactgcggtgcttcccacgttgtcaccccgtgtttaaattg
ttacaacctcacctcaagacagtccccaatataaacactgacgctagggtgctggttatt
ccacccaagtctcttgtgaacaaatcaaaccacttgagtggttcgtcattcatacgtgaa
tgtttcaaaaccttcgatatttctcaacttgatatcccgagtatgattcggaaaaacgga
actgacgattgtggggatctacctaattaccattaccgtgatgacgcaatcaaaatctgg
aatgtcatacaagattacgtgtctgacgtcatacgttactattactggtcagataaagac
attgtcaacgattatgaactgcagggctgggcgcacgatgtcgctgtggaggggttcggg
tggcaagacgggaacactagaggcgctccagagaatattgtttccgtcgagcagctggtg
tggtattgcactctcatcatattcacaagctctgcgcaacattcagccgtcaattttggc
cagcgtgagacttacaagtttattcctaacgcccctggttgcatggtgttgcctgttcat
aaacgtggcgagggatcattggaacgtataatgagcagccttccagggatcagggtatct
agtctgattatttcattcgcatattctctttccgaattcacacagaacgagatatatctt
ggagatttcccggaacgtttgtttagcgaagaagaagttttagagtttcagtttttgttt
aaacgaaaattagacaaactggcaaccgagttgaaaagaagaaaccaagatttaaaatat
ccatatattgatcttatgccaggccgtattcctattagtatatcgatataa
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