Ciona intestinalis (yellow sea squirt): 100178563
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Entry
100178563 CDS
T01056
Name
(RefSeq) arachidonate 5-lipoxygenase-like
KO
K00461
arachidonate 5-lipoxygenase [EC:
1.13.11.34
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00590
Arachidonic acid metabolism
cin01100
Metabolic pathways
cin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09103 Lipid metabolism
00590 Arachidonic acid metabolism
100178563
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100178563
Enzymes [BR:
cin01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.34 arachidonate 5-lipoxygenase
100178563
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Gene cluster
GFIT
Motif
Pfam:
Lipoxygenase
PLAT
Motif
Other DBs
NCBI-GeneID:
100178563
NCBI-ProteinID:
XP_002123695
Ensembl:
ENSCING00000007639
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Position
7:1853217..1860549
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AA seq
694 aa
AA seq
DB search
MGNQRSRACDNNEQDTATYTIVFKTNAEFVGSGTDSTVSIELFGEDGAVSTGSVKLDQEF
YDNFEPGRLDTFTTELKDVGLPLIVRIKLKHDTDAKDSLLCDFIKVSVNDQEATFPVCDW
IYDEIEVTRGEAILPQKVKNIHLSSMIERELKKADAKFSWIPRPTENDIGWGFPRYVNAV
TYKDLPDVFQRTKIRQLAQTTNKLESGIHLMLKQLESTACPLENLESFHYLYEREAVEVA
NDRSYISDWDTDEGMGRQVLNGISPLVLQKCSKLPNNLNVTNSDVLSSLAPGTTLETNMA
AGKIYISDYSEMLEGAIRNIDPATKLPLHCANSIALFYSKPNEKFVPIAIQLVPGDRNYL
FTPSSAEHDWLLAKMYYRCSQANAHEWLFHYSNTHSVSGTGGTALYKYFPKCHPVFKLLQ
PHLRTVEAINTDARATLLPEGSSTNKSMAISATSLARKAYKTFHHNDIVIPKLLKKQGTD
DPELLPGYYYRDDAIAHWKIMEKYIRSVLSFYYKSGEDIISDFCLQTWAQGSVTEGIAWQ
DNNPRGFKSHILSLDELVEACTTIMFTSSVQHAAVNFGQFETYKYIPNSPFSMRLPPHKV
GEGSMARIMNSLPDNGISNRSIAVSYTLSQYAPNEVYLGEFPDRLFVETEIEEIQEEYRK
DLQELGKKIEKRNKDLQHKYTYLHPKNIPNSIAI
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgggaaatcaaagaagtagagcatgcgataataacgaacaggacaccgccacctacacc
attgtatttaagacaaatgctgagtttgtgggcagtggtactgactcgactgtctcaatt
gagttatttggtgaggatggagctgtttcaactggttcagttaaattggaccaagagttt
tacgacaactttgaacctggaaggttagacactttcaccactgagctcaaagacgttggt
ttgccgcttattgttcgaataaagttaaagcacgatactgacgcaaaggatagtttgctc
tgtgattttataaaggtgagcgtaaacgatcaagaagcaacattcccagtatgtgactgg
atttacgacgaaatagaagttacaaggggagaagcgatcctcccgcagaaagttaaaaac
atccatctgtcgtctatgatcgaacgagaactaaaaaaggctgatgcaaagttttcgtgg
attccccggcctacagaaaacgacattggttggggatttcctagatatgttaatgctgtt
acttacaaggatcttcccgatgtatttcaaagaacgaagattcgccagttggcacagacc
accaacaaattggaaagtggaattcaccttatgttaaagcaactcgaaagtactgcatgc
ccactggaaaacctcgagtcttttcattacttgtacgaacgagaggcagtcgaggttgcg
aatgatcgaagctacatttcggattgggacacagatgaaggaatgggaagacaagttctt
aacggcatcagtcctttggttctacaaaagtgttccaaattgccgaataacttaaacgtt
acaaacagcgacgttctgtcatcactcgcaccggggaccacccttgaaacaaatatggcg
gcggggaagatatacatcagcgattacagtgaaatgctagaaggcgcgatacgtaacatc
gatccagcaacgaagctacctttacactgcgcaaactcaatcgcgctcttctattccaaa
cccaacgagaagtttgtcccaattgcaatacagttggtgcccggcgatcgaaactatttg
ttcaccccttcttctgcagaacatgattggttgttggcgaagatgtattatcgctgctct
caagcaaatgcacatgagtggttgttccattactccaacacgcacagcgttagcggcaca
ggaggtaccgcgctgtataagtatttccccaagtgccacccagtgtttaagttactgcaa
ccacacttacgaactgtggaagcaatcaacactgatgcgagagctaccctactacccgaa
ggatcgagcacaaataaatcaatggctatttctgcaacttcacttgcaagaaaggcttac
aaaactttccaccataatgacattgtgattccaaaacttctgaagaagcaaggtaccgac
gatcccgaactattaccaggatattattacagagacgatgcgattgctcattggaagatt
atggaaaagtatatacgcagtgtgttaagcttctactacaaatcgggagaggacatcata
tccgacttctgcctacaaacgtgggcccaaggcagtgtaacagagggcattgcatggcag
gataataatccacgaggatttaaatctcacattttatcgctggacgaattggttgaagca
tgcactactattatgttcacgagttctgtccaacacgctgcagtcaactttggacagttt
gaaacttacaagtatattcctaactcccctttctccatgaggttacctccacataaagtt
ggagagggatccatggctagaatcatgaattcccttcccgataatggaatatcaaaccga
agtattgcagtttcatacactctttcacaatatgcaccgaatgaggtttacctgggagag
tttcctgatcgacttttcgtagaaactgagattgaagaaatccaagaagaatacaggaaa
gatctacaagaattgggcaagaagatagagaaacgaaacaaagaccttcaacacaagtat
acgtatttacatccgaaaaatattcccaacagtattgcaatatag
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