Ciona intestinalis (yellow sea squirt): 100181980
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Entry
100181980 CDS
T01056
Name
(RefSeq) trifunctional enzyme subunit alpha, mitochondrial
KO
K07515
enoyl-CoA hydratase / long-chain 3-hydroxyacyl-CoA dehydrogenase [EC:
4.2.1.17
1.1.1.211
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00062
Fatty acid elongation
cin00071
Fatty acid degradation
cin00280
Valine, leucine and isoleucine degradation
cin00310
Lysine degradation
cin00380
Tryptophan metabolism
cin00410
beta-Alanine metabolism
cin00640
Propanoate metabolism
cin00650
Butanoate metabolism
cin01100
Metabolic pathways
cin01212
Fatty acid metabolism
Module
cin_M00032
Lysine degradation, lysine => saccharopine => acetoacetyl-CoA
cin_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
100181980
00650 Butanoate metabolism
100181980
09103 Lipid metabolism
00062 Fatty acid elongation
100181980
00071 Fatty acid degradation
100181980
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
100181980
00310 Lysine degradation
100181980
00380 Tryptophan metabolism
100181980
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
100181980
Enzymes [BR:
cin01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.211 long-chain-3-hydroxyacyl-CoA dehydrogenase
100181980
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
100181980
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
Motif
Other DBs
NCBI-GeneID:
100181980
NCBI-ProteinID:
XP_002119595
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All DBs
Position
1:1318495..1327963
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AA seq
765 aa
AA seq
DB search
MSSLIRTLRHPCLKRHLFLKRHSGERHLSISSLLNGKHMNIDYQDDVAVVRLDKADAKMN
TLSTEVMTEFQDIFNEIQRNKSVKAAVLISAKPGNFVAGADIDMLKNAGSAEETTALAKN
GQRLFHELENSKKPFVAAINGVALGGGLELTLACQYRIATTDKSTNLGVPEVMLGLLPGA
GGTQRLPQLVGVASALDMALTGKNIKAKKAKRMGLVHQLVEPLGPGLVDAQTGTMQYLER
IAVDTARGLANGSVKIPPIKHSQQDRIIAYLLKFGFFENYFFNKMIKGKVMKQTKGLFPA
PLLIADVIREGVINGHDKGYEAEAAGFGKLSQTNESKALIGLYDGQTHCKKNRFGKPAKP
AQNIAVLGAGLMGAGIAQVSMDKGYNVTLKDSFSSGLAKGQEQIYKGYNLSAKKKKITTF
ERDQIVAKLDATLSYDSLKTSDMVIEAVFEDINIKHKVIKETEAVIPEHCIFASNTSALP
ISDIAKASKRPEKVIGMHYFSPVDKMQLLEIITTDTTSKDTVASAVQVGLKQGKLVIVVK
DGPGFYTTRLLAPTLSEVIRMLQEGVGPQKIDKLATSFGFPVGIATLLDEVGIDVAVHVS
EYLGGVFGDRFAGGNVQVLKNLVDSGCAGRKTGKGVYVYSDAKAKTRPVNDTATKILKEF
AMEPVDAVSSDSDIQLRLISRFVNEAVMCLQEGILDNPLEGDIGAVFGLGFPPHLGGPFR
YVDLHGAAPLVEHMRRFEAAYGPAFTPCSLLLEHAKDSSKKFHLS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacttattcgaacactgagacacccatgtttgaaacgtcatttatttttaaaa
agacattctggtgaacgacatttatcaatttcatctttgttgaatggcaaacacatgaac
attgactatcaagatgatgtagctgttgtaagattggacaaagcagatgcaaaaatgaac
acactaagcactgaagtaatgactgagtttcaagatattttcaatgaaattcaaagaaac
aaatctgtgaaagcagccgtgctaatatctgccaagcctggaaactttgtagctggtgct
gatatagatatgcttaaaaatgctggaagcgctgaagagacgacagctcttgcaaagaac
ggacaacgacttttccatgaacttgaaaacagcaagaaaccatttgttgctgcaatcaat
ggtgtagcattgggaggaggacttgagctaacactggcttgccaatatagaatcgcaact
actgacaaatccaccaaccttggagtgcctgaagttatgcttgggttgttaccaggtgct
ggaggaacacagagacttccacagttagtaggagttgcatcagcattagatatggcactt
acagggaagaacattaaagctaagaaagcaaaaaggatgggcctcgttcatcaacttgta
gaaccgctgggtcctggattggttgatgcacaaacagggaccatgcaatacctggagagg
attgctgttgatacagcacgtggcctcgctaatggaagtgtgaaaataccaccaatcaaa
cattctcaacaagacagaataattgcttaccttctaaagttcggattcttcgaaaattat
ttcttcaataaaatgatcaaaggaaaagtaatgaaacaaaccaaaggtttattccctgca
cctctgcttattgctgatgttataagggaaggggtaataaacggacatgacaaaggatat
gaagcagaagctgccggatttggaaagttgtcgcaaacaaatgaatctaaagcccttatt
gggttgtatgatggacagactcactgtaagaagaatcgatttgggaagccagctaaacct
gctcagaacatagcagtacttggtgctggcttaatgggtgcaggcatagcacaagtaagc
atggataaaggttacaatgttacgctgaaagattccttcagttctgggttggctaagggt
caggaacaaatctataaaggttataatttgtctgcgaagaagaagaaaataacaactttc
gaacgtgaccaaattgttgcgaaacttgacgcaactctttcttatgattcactcaagaca
tcagacatggtgatcgaggccgtgttcgaagatatcaacattaaacataaagttatcaaa
gaaactgaagctgtgatacccgaacattgtatatttgcatcaaacacttcagctctccca
atatcggatattgccaaggcaagcaagaggccagaaaaggtaataggaatgcattacttt
tcaccagtggataaaatgcagctgttagaaatcattacaacggacacaacatctaaagat
acggtcgcttctgctgtacaagttggtttaaagcaagggaaacttgtcatagttgttaag
gatggtcccgggttctacacgactcgtctcctcgctcccactctctccgaagtaatccgg
atgttgcaggaaggtgttggtcctcagaagattgataaactcgcaacatcattcggattt
cctgtcggaatcgcgactctgcttgatgaggttggtatagacgttgctgtccacgtgtct
gaatacctggggggtgtgtttggtgatcggtttgcagggggtaatgtacaagtgctcaag
aaccttgttgacagtggttgtgcaggtcgcaagacaggaaaaggcgtttatgtttattct
gatgcgaaagcaaagacgcgaccagttaacgacacggctaccaagatattgaaggaattt
gccatggaaccagttgatgcagtttcaagcgacagcgatatccaactccgattaatatcg
cggtttgtaaacgaggcagtgatgtgcttgcaggaaggtatcttggataaccctcttgaa
ggagacataggagcagtgtttggccttggattcccaccacacttaggaggtcccttccgc
tacgttgacctgcatggtgctgcgccactagttgaacatatgcgtcgattcgaggctgca
tacggaccagcattcaccccatgctcactgctgctagaacatgcaaaagattccagcaag
aaattccacttgtcctag
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