Chondrinema litorale: OQ292_02405
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Entry
OQ292_02405 CDS
T09098
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_02405
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_02405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_02405
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_02405
Transporters [BR:
clit02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OQ292_02405
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_02405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
RsfS
Patched
Motif
Other DBs
NCBI-ProteinID:
UZR94669
LinkDB
All DBs
Position
581759..584830
Genome browser
AA seq
1023 aa
AA seq
DB search
MKLPNIAIKNYKLVLIAVALASLSGLSSYLTMKRSEDPLLSNPDYIITVVYPGTGPKDME
ELVVDPIEEAIDELEDIKEINTTIEEGLATIMVKGVWGVDPDEQHDELIAEVNSMKPSLP
EDIFQIEVTQVTPKQVSIMQLALTSETATYRHMHDYAEELEKQLEKVNGVKTVEIQAYPE
QEVWVSLDFQKMANQNVPLSQVINTLRGNNAIVPGGNVKSGGRSFTVKTSGGYKTMEELA
STVITSGDGKLVYLRDIAKVHLDCKDQQYYARFNGEKALFLSITQKDDVNILELTDAINT
SIIDFQFQLPVELTLHQVFVQGPSVSQRIQGFVGNLGQGVALIGILVLIFLGVRSAAVII
TVIPTSIIISIGMLNGTGFGLHQISIVGLVIALGLLVDNAIVVVDNITRFMQEGYSLRQA
AAKGTSEVGNAVISSTITTVLSFMPLAIMDGAEGLFLRSLPLIVIFALITSLILALTFSP
ILSRYILKAPISGKKPSQIDRGIQRIISGPYRQMLNFGLRHPAITLVMAILTFIGGIALF
PLVGVSLFPTADKPLYLVDIETPKGSNLDKTDAAARFVESVVDTMPGILSYATNVGHGNP
QIYYNRLSKSYTRNYAQVLVNLDSYEEEQFYATLHQLRDAFTQYPEARITLSELKQGVPV
EAPIAIKILGQDLETIKAIGKDLEALFKRTPGTINTYNPLSIDKTDIKVDINRDKAGLIG
LSLYDIDLAVRTSLTGLVVDEMTMDNGDQFNIVARLSYDKQLTLGDFDKIYTTNITGDKV
PLNQVAQLKFTRSNAQIDHYNTDRTVTITADVLDDYNIMVVTQHILDELDQYDFPEGYYY
HVSGEYKAQQESFGNTGQSLLIALIAIFAVLVLQFKSFRQPMIVFSAIPLAFTGSIVTLF
ITGWTFSFFAFVGFTSLVGIVINTSIILIDYTNQLRDSGFSMVRAIKKAAETRFKPIVLT
TLTTILGLLPLTLSSGDLWPPLGWTIIGGMISSTFLTLIIVPVLYKLFSSKQILEEEEVM
AEV
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccctaatatagccatcaagaattataaacttgttctgattgccgtggctctc
gcctccttatctggcctatcttcctacctaacgatgaagcggtctgaagatccccttttg
tccaatcctgattacataattacggtcgtatatcccggtacagggccgaaagatatggaa
gaattggtggtagatcctattgaagaagctattgacgaactggaagacattaaagagatc
aatactaccatagaagaaggactagccactataatggtaaaaggtgtttggggagttgat
cctgacgagcagcatgatgaattaattgccgaagtgaacagcatgaaacccagtctgcct
gaagatatctttcagattgaggtaacacaagtaactcccaagcaagtatccattatgcag
ctggcattgacttccgaaacggctacttatcggcatatgcatgattatgccgaagaactg
gaaaagcagttagagaaggtaaacggagtgaaaactgtggaaatacaggcttaccctgag
caggaagtatgggtctctctggattttcaaaaaatggccaatcagaatgtgcctttaagt
caggtgatcaacaccttgcgaggaaataatgcaatcgtacctggtgggaatgtcaaatcc
ggaggacgatccttcacggtgaaaaccagcggtggttataaaaccatggaggaactggcg
tctacagtcatcacatcaggagatgggaaactagtctacctgcgcgatattgccaaagta
catcttgactgcaaggaccagcaatattacgctcgctttaatggggagaaagctttgttt
ctatcgattacccagaaagatgacgtaaacatcctggaactaaccgatgcgatcaatact
agtatcatagactttcagttccaattaccggtcgagttaacactacatcaagtatttgtg
caaggaccatccgtatctcagcgcatccagggttttgtgggtaatctgggacaaggagtt
gccctaatcggcatactcgtacttatctttttgggtgtacgctcagcagcagtcatcatc
accgtcatcccaaccagcattatcatatctattggtatgctcaacggtacgggcttcgga
ctgcaccagatttctattgtggggctggtgattgcattagggttgctggttgataatgcc
atagtggtggtggataacatcacccgttttatgcaggagggttattctctacgacaagca
gcggctaagggtacttcggaggtaggcaatgctgtcattagttctaccattactaccgtg
ctttcctttatgccactggcaattatggatggtgcggagggtttgtttctccggtcttta
cctttaattgtaatcttcgccctgatcacctctctaattctggctctcaccttttcccct
atattgtcacgttacatcctcaaggctccaatatctgggaagaagccttcccagattgat
cggggaattcaacgtattatttcaggaccctaccgtcagatgctgaacttcgggctacgt
catccagccattactctggtgatggcgattttaacctttatcggagggattgctttattt
ccactggtgggagtaagcctcttccctaccgctgataagccattgtaccttgtggatatt
gagaccccaaagggtagtaatctggataaaaccgatgcagctgcccgcttcgttgaaagt
gtagtagatactatgccaggaatattgagttatgctactaatgtaggccatggaaatcct
caaatttactataatcgcttaagcaaaagttatactcgcaactatgctcaggtactggta
aacctagactcctacgaagaagagcaattctatgctacattacatcagttacgggatgct
ttcactcaatatccggaagcgcgaattacactctccgagctgaaacagggtgtaccggta
gaggctcctattgccatcaagatcctcggccaagatctggagacaattaaagctatcggt
aaggatttggaagcacttttcaaacgtacacctgggactatcaacacctataacccacta
tctattgataagactgatattaaagtggacatcaatcgggacaaagccggcctgattggg
ctatcgctatacgatattgatctggcagtacgtaccagtctgactggattggttgtggat
gagatgacaatggacaacggtgatcagtttaatattgtagcccgtctgtcctatgacaag
cagcttactttgggcgatttcgataagatttacactaccaatatcactggcgataaagta
ccactgaaccaagtggctcaactaaaatttactcgtagcaacgctcagatcgaccattat
aacaccgatcgcacggtaaccatcaccgcagatgtgctggacgattacaatatcatggtg
gtgactcagcatattctagacgaacttgatcagtacgatttcccagaaggttactattat
catgtctcaggagagtacaaagcacagcaggaatctttcggaaacaccgggcagagcctg
ttaattgctctgattgccattttcgctgtgctggtgctccagttcaaatccttcaggcaa
ccgatgatcgtgttttcggctataccgctagcttttaccggatctattgtaacccttttc
attaccggctggaccttctctttcttcgctttcgtgggtttcacaagtttggtggggatt
gtgattaacacctctatcatcctgattgattatacaaatcagttacgggattcgggtttt
agcatggtcagagctatcaagaaagctgccgaaactcgcttcaagcctatcgtgttaacc
accctaacaaccatcttaggattgctgccgctgactctttcttccggtgacctatggcct
ccgttgggatggaccatcattggtgggatgatatcatcgaccttcctcaccctaataatt
gttccggtcttatacaagttgttcagcagtaagcaaatacttgaagaagaagaagtaatg
gccgaagtatag
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