Chondrinema litorale: OQ292_11980
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Entry
OQ292_11980 CDS
T09098
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_11980
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_11980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clit03036
]
OQ292_11980
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_11980
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_11980
Chromosome and associated proteins [BR:
clit03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OQ292_11980
Transporters [BR:
clit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OQ292_11980
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_11980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
FLgD_tudor
CHB_HEX_C_1
Motif
Other DBs
NCBI-ProteinID:
UZR92580
LinkDB
All DBs
Position
2889057..2890124
Genome browser
AA seq
355 aa
AA seq
DB search
MKLNTKTISIGLIVIIVATLVIAKMDFSQAEDGQSVTTSGKENKGIFVRAMEISKETIEE
RLVSKGSIIPNEEVMITSESSGKVTSISFNEGDIVKKGQLLVTLDDRELVSELEKYKHER
DFLEKKSEREKKLNERGGISDEQYEETIRDLQTTISEIDLINTQIDKKKIRAPFSGKIGL
RYISEGSYITPSDVIAGLVDASTIKIDFTLPEKYMAKIKTGTDIHFSVDGTDEDFSGKIY
AIEPKIDVSTRTISLRAKAQNTNGRILPGAFANITIILNRIENTLCVPTEAIIPEMNTKR
VFLSRNGKAESVEVETGLRLPEKIQIVNGLNEGDSVVISGILQIRNGSSLNVLPE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaatactaaaacaatctctattggtctaattgtaattattgttgcaacattg
gtaattgccaagatggatttttctcaggctgaagacggtcaatctgtaaccacttctggc
aaagaaaataaaggcatatttgtaagagcgatggagataagtaaagaaacaattgaagaa
agacttgtttctaagggttcaattattcctaatgaggaagtaatgataaccagtgaatct
tctggaaaagtaacatctatttcttttaacgaaggtgatattgttaaaaaaggacagcta
ctagttacgcttgatgacagagaacttgtttcagaattagagaagtataagcacgaacgt
gattttttagaaaaaaaatctgagagagagaaaaaactgaatgaaagaggagggataagc
gatgagcaatatgaagaaactattagagatttacaaaccactatttcagaaattgatctg
ataaatacgcaaatcgacaagaaaaaaataagagctccattttctggtaaaatcggttta
agatatataagtgaaggtagttacattactccttctgatgtaattgcaggtttagttgat
gcgagtactattaagattgattttactttgccagagaaatacatggcaaaaattaaaaca
ggtacagatattcactttagtgtagatggtactgacgaagatttttcaggtaaaatatat
gctattgagcctaaaattgatgtatctaccagaacgatatctttaagagcaaaagcgcaa
aatacaaatgggagaatccttccgggtgcatttgccaatattacaattatacttaatcgc
atagaaaatactttgtgtgttcctaccgaagctataattcctgagatgaataccaaaaga
gtattcttgtctagaaacggaaaggcagaatctgtagaagtagaaactggtttacgctta
cctgaaaaaattcagattgtaaatggattaaatgaaggtgactctgtagtaatttctggt
attttacaaatcagaaatggctcaagtttaaatgtattaccagagtaa
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