Chondrinema litorale: OQ292_15040
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Entry
OQ292_15040 CDS
T09098
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_15040
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_15040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clit03036
]
OQ292_15040
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_15040
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_15040
Chromosome and associated proteins [BR:
clit03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OQ292_15040
Transporters [BR:
clit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OQ292_15040
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_15040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
Biotin_lipoyl_2
HlyD_3
Biotin_lipoyl
HlyD_2
RSC4_Ig_like
TAF10
Motif
Other DBs
NCBI-ProteinID:
UZR93174
LinkDB
All DBs
Position
3639803..3640909
Genome browser
AA seq
368 aa
AA seq
DB search
MRVNLIWPAIIYLLTLGACSTETSNAPQAAGPMPFAVLQVAKQSVTVNQEYIANLQGQQN
VEIRPKVSGFIQKIYIDEGEEVKKGQLLFKLETQTLNEDAGAAKAQIQSAQVEVDRLIPL
VERKIISQVQLDAAKAQLSQAKSNYSAITANIGYANITSPVSGVVGGLPYKEGSLVSAND
AEPLTIVSDIRKVRAYFSINEKQLLHFSKKYKGVTLDAMVDSMPAVSLKMVDNSLYDHQG
KIQTINGLINERTGTIDCRAVFPNPDRMLRSGGSGTILLPITQNNIFLIPQVAVFELQGK
KLVYLVGGDNKVNTKVIVTNGTSNKDYIVIDGLKEGDKLVAEGISKLQDGQEIIPDTSTS
KSNLSFVE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgagagttaatttaatttggccagctatcatttatctattgacactaggtgcttgtagt
acagaaacttcaaatgcgccacaagcagccggtccaatgccatttgcagtattgcaagtt
gcaaaacaaagcgtaacagtaaaccaagagtacatcgcaaatttacaaggtcaacaaaat
gtagagatcagaccgaaagtatctggctttattcagaaaatctatattgacgaaggcgaa
gaagtaaaaaaaggacagttattattcaaactggaaacacaaactttaaatgaagatgcc
ggggctgccaaagctcaaattcaatcggcacaggttgaagtagaccgattaattcctcta
gttgagagaaaaattataagtcaagtacagcttgatgctgctaaagctcagttatcgcaa
gcgaaaagtaattacagcgccattactgcaaacattggctatgctaatattactagtccg
gtttcgggtgtagttggcggtctgccttataaagagggtagtcttgtgagcgcaaatgat
gctgaaccacttactatagtttcagatattagaaaggtaagagcttatttctctatcaac
gaaaagcaattattgcactttagcaaaaaatataaaggtgttactttagatgctatggta
gattctatgccagcggtttctttaaaaatggttgataattctttgtacgatcatcaagga
aaaatacaaactattaatggtttgattaacgagcgaacaggaactatcgattgcagagct
gtttttcctaacccagacagaatgttgagaagtggtggtagtggaacaattttacttcct
attacacaaaataacatattcttaatccctcaagtagctgtttttgagttgcaaggtaaa
aaattagtgtatctggtagggggtgataacaaagtaaacacgaaggttattgtaactaat
ggaacatcgaataaagattatattgtaatcgatggattaaaggagggggataaattagta
gctgaagggatttctaaactgcaagacgggcaagaaattattcctgatacatctacttca
aagtctaatttatcttttgtagagtaa
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