Chondrinema litorale: OQ292_18345
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Entry
OQ292_18345 CDS
T09098
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_18345
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_18345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clit03036
]
OQ292_18345
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_18345
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_18345
Chromosome and associated proteins [BR:
clit03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OQ292_18345
Transporters [BR:
clit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OQ292_18345
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_18345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
CusB_dom_1
Peptidase_M23
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
UZR93811
LinkDB
All DBs
Position
4446356..4447429
Genome browser
AA seq
357 aa
AA seq
DB search
MTNYTKYLPLMLFLFAACSVEKKTETIVKETKAIPVKIEKIEESNEPIPIESSGILAAKE
EVRLSFKTGGILENIYVDEGQKVQKGQLLASLSPEEIDSQVLQAKASLEKAKRDLQRAEI
LYKDTVVTLEDLQNSKTALEVAQANMEIASFNQQYSKIYASTNGRVLQRLAEQNEVLSPG
TPVFLLASSEKSQIIRVGLADKDVVKLQLGDSAIVKFDAYDRENFKAKVTEIAATASPVG
TFEVELSIQPSKYELKQGFVGKTSIFPSKQAPYYKVPVSAIFEADKKAVYVFVPDKDQQT
VSKIKLETTGIGEDFLIVNKETAKQLDFVITEGNAYLNNGSSITPKQLTSNSSLVTR
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgactaattacacaaagtatttacccttaatgcttttcttatttgctgcgtgttcagtt
gagaaaaaaacagaaactattgttaaagaaactaaggctattcctgtgaaaattgaaaaa
atagaagaaagtaatgagccaattcctattgaaagtagcgggattttagctgctaaagaa
gaagtaagactttcttttaaaacaggcggaatattagaaaatatttatgtggatgaagga
caaaaagtgcagaagggtcaactattggcaagtttgtctcccgaagaaatcgattctcaa
gttttgcaagcaaaagcatcgttagaaaaagccaaaagggatttgcaacgcgctgagatt
ttgtataaagacacagttgttacactagaagatttacaaaatagcaaaacagctttagaa
gttgcacaggctaatatggagattgccagctttaatcagcagtattcaaaaatatatgct
tcgaccaacggtcgggttttgcaaagattggcagagcagaatgaggtattaagtccggga
acaccagtgtttttactggcatcatcagaaaaatctcagattataagagtcggcttggca
gataaagatgtggtgaaactgcaattaggagatagtgctattgtaaaattcgatgcttac
gatcgtgagaacttcaaagccaaagtaacagagattgctgctactgcctcgcccgtgggt
acatttgaagtagaattatctatccagccttcaaaatatgaacttaaacaaggctttgtg
ggtaagacctctatttttccatcaaagcaagcgccttattacaaagttccggtgagtgcc
attttcgaagccgataaaaaagcagtatatgtttttgtgccagataaagaccaacaaact
gtctctaaaattaaattggaaaccactggaataggagaggactttctaattgtaaataaa
gaaactgcaaaacaattagactttgtaattactgagggaaatgcttatctcaataatggt
agcagtatcactccaaaacaactcacatccaattcttcactggtaactcgatag
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