Chondrinema litorale: OQ292_20975
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Entry
OQ292_20975 CDS
T09098
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_20975
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_20975
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_20975
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_20975
Transporters [BR:
clit02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OQ292_20975
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_20975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Patched
Motif
Other DBs
NCBI-ProteinID:
UZR96625
LinkDB
All DBs
Position
unnamed2:complement(151031..154201)
Genome browser
AA seq
1056 aa
AA seq
DB search
MFSKIIHRPVFAIVISVIIVFTGTLAIQQLPISQFPQIAPTTVNIFIAYPGASADVLVKS
TLVTLENSINGVQGMRYMATDATSAGEATLRVIFEPGTDPNLAVIRVKTRVDQVMPLLPE
LVQREGVVITPIQPSMLMYVNLYSTDEHMDEKFLYNYANVQMIPEIQRIKGVARAQILGS
RRYAMRLWLNPDRMRAYNISVEEVMEALAEQSIVGRPGRLGQSSGISAQSLEYVLTYKGR
YNKPEEYEDIIIRANSEGESIHLRDISKVELGSEFFDIYSNLDGHPSAAIVLKQNYGSNA
SDVIDEVKATLKEMEATFPPGVDYKISYDVSQFLDASIEQVVHTLRDAFILVAIVVFIFL
GDWRSTLIPILAVPVSLVGAFFVIQMFGMSINLVTLFALVLAIGIVVDDAIVVVEAVHAK
MEEKHLNPYNAVKEVMGEISGAIIAITAVMVSVFLPISFMSGPVGTFYRQFSITMASSIV
ISAIIALTLTPVLCAMILKNDHGKEKKRNILNRSIDSFNRGFDKLTGKYTGVLRHMVSKR
WLTFIILVTFSVGILYVNQVVPAGFIPNEDQGTIYAIIQTPPGATLERTNKVAQALQKIC
EEIDGVESVSSLAGYEIMTEGRGSNAGTCLINLKKWSEREHTVTEIMEELEEESRGLGAI
VEFFEPPAVPGFGSSGGFSMRLLDKTTSTDYQEFDKINQQFLDNLRKRKELTGLFTFFAA
NYPQYELEIDNKAAMQKGVSIGKAMENLNILIGSTYEQGFIRFGRFFKVYVQSAPEFRRL
PSDVLNLFVKNEEGEMVPYSSFMKIKKKQGPNEVTRYNMYNSAAIRGLPAAGYTTADAIT
AIREVAQETLPKGYDIAWEGLSYDEANRGNESLYIFLIVLAFVYMVLAAQYESFILPLAV
LLSLPVGIFGSFMLLKLMGLSNDIYAQVGLIMLVGLLGKNAVLIVEFAVMKRAQGATVLE
SAIEGAKVRFRPILMTSFAFIAGLIPLIIATGAGAIGNRTIGSSALGGMLFGTIFGVLII
PGLYYIFGKLADGKKLIRDEYDEPLSEEPYHHKTNV
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtaaaataatacataggcctgtattcgccattgtaatttcggttattatcgtt
tttacaggtacactggcaatacagcagctgcctatatcccaatttccgcaaattgcacca
actacagtcaatatatttatagcatatcctggagcgagtgcagacgtattagttaaatct
actctagttacactagaaaactccattaacggtgtgcagggtatgagatatatggcgaca
gatgctactagtgctggtgaagccacacttagagtaatttttgaaccaggtacagaccct
aacttggcagtaattcgggtaaagacgcgagtcgaccaggtaatgccgctattaccagaa
ctggtgcagagagaaggtgtagtaattacgcctatacagccaagtatgttgatgtacgtc
aacttatatagtacagatgaacatatggatgaaaagttcttatacaactacgccaatgtt
cagatgattcctgaaatccaaaggattaagggtgttgcaagagcccaaatcttgggtagt
agaagatacgcgatgcgtttgtggttaaacccagaccgtatgagagcttacaatatttct
gtagaggaagtaatggaagcattagccgaacaaagtatagtaggtcgcccaggtcgttta
ggacaaagctcaggtatttccgcacaatcattagaatacgtattaacttataaaggtagg
tataacaaacctgaagaatacgaagacattattattagagcgaattctgaaggtgagagt
attcatttaagagatatatcaaaggtagagttaggtagtgagtttttcgatatctattca
aacttagatggccacccatcagctgcgattgtattaaagcaaaactatggtagtaacgcg
agtgatgtaatcgacgaagtaaaagctacactaaaagagatggaagccaccttccctcct
ggtgttgattacaaaattagttatgacgtttctcaattccttgatgcatctatagaacaa
gttgtgcacacattgagagatgcatttatattagttgcaattgttgtgttcatcttcctc
ggcgattggcgttcaacacttatcccgattttggcagtacctgtttcgttggtgggagcc
ttcttcgtcatacagatgtttgggatgtcgattaaccttgttacactctttgcacttgta
ctggcaattggtattgtggtggatgatgcgattgttgtggtggaagccgtacacgcgaag
atggaagaaaaacatctcaatccatataatgcggtaaaagaagtaatgggagaaattagt
ggtgcgatcatcgcgattactgcggtaatggtatccgtattcttacctatctcattcatg
tcaggtcctgttggtacattctaccgtcagttctctatcaccatggctagttcaattgta
atctcggcaattatcgcgcttacacttactccggtattatgtgctatgattctgaaaaac
gatcatggtaaagagaaaaagagaaatatccttaacagatctattgatagctttaacaga
ggatttgataaactcacaggaaagtacactggcgtattaagacacatggtaagcaaaaga
tggttaaccttcatcattctggttacctttagtgtgggtattttatatgtaaaccaagtt
gttccagctggtttcatccctaacgaagaccaaggtactatctatgcgattatccaaaca
cctccaggtgctactctagaaagaactaacaaagtagctcaggcattacagaaaatatgt
gaggagatagatggtgttgaatcagtttcttctttggcaggttacgagatcatgacagaa
ggtaggggttctaatgctggtacatgtttgatcaacttaaaaaagtggtctgaacgtgag
cataccgttaccgaaattatggaagaattggaagaggaatcaagaggacttggtgcaatt
gttgaattcttcgaaccaccggcagtacctggtttcggttcttcaggtggtttttcaatg
cgtttgttagataaaactactagtacagattatcaagaatttgataaaataaaccaacag
ttcttagataaccttcgcaagcgtaaagagcttactggattatttaccttcttcgcggct
aactatccgcaatacgaattagaaatagacaacaaagcagcaatgcaaaaaggtgtttct
attggtaaagcaatggaaaacctaaacattttaattggtagtacttatgagcagggtttt
attagatttggtcgtttctttaaagtttacgttcagtctgctccagaattcagaagactt
ccttcagatgtattaaatctatttgtgaagaatgaagaaggagaaatggtgccttattca
tcattcatgaagattaaaaagaaacaaggtcctaatgaggttactcgctacaacatgtat
aactcagcggctatcagggggcttccagcagcaggctacacaactgccgatgctattaca
gccattcgtgaagttgctcaagaaaccttaccaaaaggttacgatattgcatgggaaggt
ctttcttatgatgaagctaacagaggaaatgaatcactttacatcttcttaattgtattg
gcattcgtttacatggtactagctgcacaatacgaaagctttattttaccactagcagta
ttactttcattacctgttggtatttttggttcgtttatgttactaaaattgatgggacta
tcaaacgatatttacgctcaggtaggtctcatcatgctggtcggtctactcggaaaaaac
gccgtacttattgtagagtttgctgtaatgaagcgagcccaaggtgctacagttctggaa
tcagcaattgaaggagcaaaagtacgtttccgtcctattttgatgacatctttcgccttt
atcgctggtttgataccattgattatagcaactggtgcaggtgccattggtaacagaact
attggttcttctgctcttggtggtatgttattcggaaccatattcggggtacttattatc
cccggactatattatatattcggaaaattagcagatggcaaaaaactgatcagggatgag
tacgacgagcctttgtctgaagaaccctatcaccataaaacgaacgtataa
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