KEGG   Chondrinema litorale: OQ292_20980
Entry
OQ292_20980       CDS       T09098                                 
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
  KO
K03585  membrane fusion protein, multidrug efflux system
Organism
clit  Chondrinema litorale
Pathway
clit01501  beta-Lactam resistance
clit01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:clit00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    OQ292_20980
   01503 Cationic antimicrobial peptide (CAMP) resistance
    OQ292_20980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:clit03036]
    OQ292_20980
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:clit02000]
    OQ292_20980
   01504 Antimicrobial resistance genes [BR:clit01504]
    OQ292_20980
Chromosome and associated proteins [BR:clit03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Divisome proteins
    OQ292_20980
Transporters [BR:clit02000]
 Other transporters
  Accessory factors involved in transport [TC:8]
   OQ292_20980
Antimicrobial resistance genes [BR:clit01504]
 Gene sets
  Multipdrug resistance modules
   Multidrug resistance, efflux pump MexAB-OprM [MD:M00718]
    OQ292_20980
SSDB
Motif
Pfam: HlyD_D23 HlyD_3 Biotin_lipoyl_2 Biotin_lipoyl HlyD_2 WEMBL
Other DBs
NCBI-ProteinID: UZR96740
LinkDB
Position
unnamed2:complement(154228..155313)
AA seq 361 aa
MKRTFILLSLCTMFWSTSCNSHKKELHEEESKFLVTSPIRMDTAITKDYVCQIHSIQHIE
IRSQEKGYLQKVFVDEGDFVKQGKLLFQVMPRLYEAEQQKAKAEANLAEIEFQNTKRLAD
SNIVAPNELAMAKAKFDKANAELSLAQVHLDFTEIKAPFDGIIDRFHVRLGSLVDEGDLL
TNLSDNSEMWVYFNVPEAEYLDYQAQVEKDHLDEVKLKLPNNKYFEYTGLVETIEADFNN
ETGNIPFRATFPNPKGLLRHGETGNIEMTFPMKNAMLIPQKATFEILDKLYVYVIDEENK
IRSRHIKVAAEMPHLFIIKEGLELNDKILLEGLRLVRENEEIEFDFVEPKTAISDLSLYA
E
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaagagaactttcatccttttaagcctgtgcacaatgttttggagcactagttgtaac
tcccacaaaaaagaattacatgaggaggaatccaaatttttggttaccagcccaataaga
atggatactgccattactaaagattatgtatgtcaaatacattcaatccagcatattgaa
attagatcacaagagaaaggctatttgcagaaagtatttgttgatgaaggagactttgta
aaacaaggaaaacttcttttccaagttatgccaagactttacgaagcagaacaacaaaaa
gcaaaagcagaagcaaatcttgcagaaattgaatttcaaaacacaaaaagacttgccgac
agtaacattgtagcgcctaatgaattggcaatggcaaaagctaagtttgacaaagcaaat
gccgagttatcattagctcaagttcatctggattttacagaaattaaagcaccatttgat
ggaataattgaccgtttccatgttagacttggtagcttagtagacgaaggagatttactc
acaaatttatctgataacagtgaaatgtgggtatactttaacgttccagaagctgaatat
ctagactatcaggcacaggttgaaaaagaccatttagacgaagtaaaactaaaattaccc
aataataaatattttgaatacactggtttagttgaaacaattgaagcagattttaacaac
gaaactggtaatattccttttagagcaacatttcctaaccctaaaggactcttaagacac
ggagagacaggtaatattgagatgacattcccaatgaaaaatgcaatgctcatcccacaa
aaagctacattcgaaattcttgacaaattgtatgtgtatgtaatcgatgaagaaaacaaa
attagatcgagacatataaaagtagctgctgaaatgccacacctcttcataattaaagaa
ggtttagaattgaatgataaaatccttcttgaagggctacgccttgtaagagaaaatgaa
gaaatagaatttgatttcgtagagcctaaaactgcaatttcagatttaagtctgtatgca
gaataa

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