Chondrinema litorale: OQ292_21580
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Entry
OQ292_21580 CDS
T09098
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_21580
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_21580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clit03036
]
OQ292_21580
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_21580
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_21580
Chromosome and associated proteins [BR:
clit03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OQ292_21580
Transporters [BR:
clit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OQ292_21580
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_21580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
BSH_RND
BSH_CzcB
BSH_CusB
YknX_C
Biotin_lipoyl
BSH_YknX
HH_MFP_RND
RND-MFP_C
DUF3053
KTSC
BSH_YhbJ
PTS_EIIA_1
NQRA_N
BSH_LcnD
Peptidase_M23
DUF6079_5th
PYNP_C
HH_AAEA_pHBA
Indigoidine_A
YwqH-like
Beta-barrel_RND_2
HH_EMRA
B3_4
Motif
Other DBs
NCBI-ProteinID:
UZR96736
LinkDB
All DBs
Position
unnamed2:314648..315820
Genome browser
AA seq
390 aa
AA seq
DB search
MKQKNIILYLGIILALVLSASLWGSFNESFNEEDEGVLATNSEGDNVFPVTHPVIMDTVY
KTDYVADIQAVQHVELKAKVEGYLTEIHVDEGESVKKGQVLFTISKQEYQVELMKASAAL
NSAIAEARTAEVEVKSATELVDNNIVSETELERAHSNLESLKSHIEEAKSDEASAKLNLS
YTEIKAPFDGVIDRIPNKIGSLVENGTLLTTISNNKEVYAYFNVSEKEYLDFMPSWSSNK
EEKVSLIMANNEVYSYKGVIETVESKVDKSTGNIAFRAVFPNPELFLKHGFTGKVRIKKA
IRNVLIIPQIATIESQDKMYVYVVDENNQVRRKSVTPLMEIPHLYVIDNDLSESDAIIYK
GLQLVKDGDEVQTKLINFIDQDSKEDLAED
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaaagaatattatactgtatctcggaatcatattagccttagttctaagtgca
tctctttggggaagtttcaacgaaagtttcaacgaagaagatgaaggcgttttggcaaca
aactcagaaggtgacaacgtctttccagttactcacccagttataatggatacggtttac
aaaaccgattatgtagctgatattcaggcagtacagcatgtagaattaaaagcaaaggta
gaaggttatctcacagaaattcatgtagatgaaggcgaaagtgtaaaaaaagggcaagtg
ctttttaccattagcaaacaagagtatcaagtagaattaatgaaagcttcggctgcctta
aatagcgccattgcagaagctagaactgctgaggttgaagtgaaaagtgccaccgaatta
gtagacaataatatagtttcggagacagaattagaaagagcgcattcgaatctggaatct
ttaaaatcgcatatcgaagaagcaaaatcagacgaagccagtgcaaagcttaatctatca
tacacagaaattaaagcaccttttgatggtgtgatcgatagaatccctaacaagatcggc
agcttggtagaaaatggtactttgctcaccacaatttctaacaacaaagaagtgtatgct
tactttaatgtttcggagaaagaatacctcgattttatgccatcttggagtagtaataag
gaagaaaaggtatctctgataatggcaaataatgaagtttatagctacaaaggagtcatc
gaaacggttgaaagcaaagttgataagagtacaggtaatattgcttttagagcggttttt
ccaaatccagaattgtttttaaagcatggttttactggcaaagtaagaattaaaaaagcc
attcgcaatgttttaatcattcctcaaattgctactatagaatctcaggataaaatgtat
gtatatgtggtagatgagaataatcaagttagacgcaaaagtgtaactcctttaatggaa
attcctcatctatatgtaattgacaatgatctctcagaatctgatgcgataatttataaa
ggccttcaactggttaaagatggagacgaagtgcaaactaaactaatcaacttcatagac
caagactcaaaggaagatttggccgaagactag
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