Chondrinema litorale: OQ292_22340
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Entry
OQ292_22340 CDS
T09098
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_22340
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_22340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clit03036
]
OQ292_22340
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_22340
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_22340
Chromosome and associated proteins [BR:
clit03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OQ292_22340
Transporters [BR:
clit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OQ292_22340
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_22340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_RND
BSH_CusB
RND-MFP_C
CzcB_C
BSH_CzcB
BSH_YknX
HH_EMRA
BSH_YhbJ
HH_YBHG
Biotin_lipoyl
HH_CzcB
BSH_LcnD
Beta-barrel_RND_2
BSH_Fcp1
Beta-barrel_YknX
ATP-synt_DE
Motif
Other DBs
NCBI-ProteinID:
UZR96399
LinkDB
All DBs
Position
unnamed2:complement(486170..487228)
Genome browser
AA seq
352 aa
AA seq
DB search
MKKFIIPSVISLVIILAIVFKLFSNKRKIDEAKEPVDRTEIPVSVKVTKAEKKALDINVH
YPATTKPYEDAKVYSQSSGIIDKLNIELGNTVSEGQTLGKLDTRLLEINLKDAEIALEKA
SDDYERAKDLYENEAGVKVDMLNAKTSYDKALNQVRLIGQQIENAQIISPIKGIISSHTV
KEGEFINPGTPIASINNVFLLKATVYVIQETVYQLELGQKAIITTPVFDQEQFTGEIIFI
SPVADANHNYQIDLLVHQKDNIHLKGGTDVQVAFNTMMRKDVLQIPKSALMVDADEPYVF
VIDNETAVSKTVKTGATRKDQVEVISGISVGDVVVTNGQINLRDGSKVNIIK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttatcataccaagtgtaatttcattagtcattatactggccattgtattt
aaactattcagtaataaaagaaagatcgatgaggccaaagagcctgtagatcgtactgaa
attcctgtttcggtaaaagttactaaagcagagaaaaaagcattagacatcaatgtgcat
tacccggcaactacaaaaccttatgaagatgccaaagtctatagccagtctagtggaata
atagataagttaaatatcgaattgggtaatacagtttcagaaggtcaaactcttggcaaa
ctcgatactcgccttttagaaattaatctaaaagatgcggaaatagctttagagaaggct
tctgacgactacgagcgcgcgaaagatctttacgagaatgaagcgggtgttaaagtagat
atgttgaatgccaagactagttacgataaggctctcaatcaagtgagacttattggacaa
cagattgagaatgcacagataatttcgccaattaaaggaatcatctcttctcatacagta
aaagaaggtgagttcattaatccgggaactccaattgcatctatcaacaatgtgtttctg
ttgaaagcaactgtatatgtaattcaagaaacagtttatcagctagaattggggcaaaaa
gcgatcattacaactcctgttttcgatcaagaacaatttacaggggagatcatttttatc
agtcctgtagctgatgctaaccataattatcagatcgatttattggtgcatcaaaaagat
aatattcatctaaaaggtggaactgatgtacaggtagcattcaatacaatgatgcgcaaa
gatgttttacaaatcccgaagtctgccttaatggtcgatgctgatgaaccttatgtattt
gtaatagataatgagaccgcagtttcaaaaacagtaaaaactggagcaactagaaaagat
caggttgaagtaatttctggaataagtgtaggtgatgtagtagttacaaacggccagatc
aatttgagagatgggagtaaagtgaatatcataaaataa
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