Chondrinema litorale: OQ292_26740
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Entry
OQ292_26740 CDS
T09098
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_26740
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_26740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clit03036
]
OQ292_26740
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_26740
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_26740
Chromosome and associated proteins [BR:
clit03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OQ292_26740
Transporters [BR:
clit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OQ292_26740
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_26740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_CusB
BSH_RND
Beta-barrel_RND
Biotin_lipoyl
BSH_CzcB
HH_MFP_RND
BSH_YknX
YknX_C
RND-MFP_C
HH_EMRA
BSH_LcnD
CarG-like
TPR_MalT
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
UZR97409
LinkDB
All DBs
Position
unnamed5:161187..162383
Genome browser
AA seq
398 aa
AA seq
DB search
MINKSLLLFCFLVFTSAFISSCGEKNNKRITQNKPVSVPVLELKSKSINLPQTYICDIQA
VQYVEVRAKVEGYVDKIFVDEGKFVKKGQPLFQLSSFEFKEMVNRASASLYQAKAEGNAA
KLEVERLKVLVDKDIITSSELELAKSKLAVAEANITEAASLLSNAKNMLSYTTIKAPFNG
IVDKVPFKTGSLVTAGDLMTNITDISEVFAYYKVNENEYLRYMREKIQQGDNAETAIKEL
SLILSDGKYYPHKGVLETLEADFERGTGSIAFRVRFPNPNGLLKHGATGKIEMTNEMKDV
FLIPQKSTFEVQDYNYVYLLNNENEVKVESFRPIKRFDVYYVVDNFKPGDRIIFEGIQQV
RDGVKVDPTPITEEEAYDNLVKRNQNTESNYLSCLNCL
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgattaacaagtctttattattattttgttttttagtgtttacgagtgcatttatatcc
tcgtgtggcgaaaaaaacaacaagcgtattacgcaaaacaagccagttagtgtacctgtt
ttagagctaaaaagtaaatctattaacctaccacaaacctacatttgtgacattcaggct
gtacaatatgtagaagttagggccaaagtagaaggctatgtagacaagatatttgtagac
gaaggtaagtttgtaaaaaaaggccaaccattatttcagttaagttctttcgaatttaaa
gagatggtaaaccgagcaagtgcaagcctatatcaggcaaaagcagaaggaaatgcagct
aaactagaagtagaaagacttaaagtacttgttgataaagacattataacctcatctgaa
ctggaactagcaaaatctaaattagctgttgctgaagcaaacattacagaagctgcttct
cttttgagcaatgctaaaaacatgctttcatatactactattaaagccccatttaacgga
atagtagataaagttccttttaaaactggtagtttggttactgctggtgatttaatgacc
aacattacagacatctcagaagtattcgcatattataaagtaaatgagaatgaatactta
agatatatgcgtgaaaaaattcagcaaggagacaatgctgaaactgcaattaaagaatta
agtcttattctttcagatggtaaatattacccacataaaggagtattagaaacactggaa
gctgattttgaaagaggtactggttctattgcatttagagtaaggttccctaatccaaac
ggacttctaaagcatggtgctacgggtaaaattgagatgacaaatgaaatgaaagatgtt
ttcttaattcctcaaaagtctactttcgaggtgcaagattacaattatgtttatttatta
aataatgaaaacgaagttaaagtagagagtttcagaccaataaaaagattcgatgtttac
tacgtagttgacaattttaaaccaggtgaccgtatcattttcgaaggaatacaacaggta
cgcgatggtgtaaaagttgatcctacaccgattaccgaagaagaggcatatgacaacctt
gtaaaacgtaaccaaaacactgaatcgaattatctatcatgtttgaactgtttataa
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