Chondrinema litorale: OQ292_26745
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Entry
OQ292_26745 CDS
T09098
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_26745
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_26745
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_26745
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_26745
Transporters [BR:
clit02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OQ292_26745
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_26745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UZR97410
LinkDB
All DBs
Position
unnamed5:162365..165523
Genome browser
AA seq
1052 aa
AA seq
DB search
MFELFIKRPILSAVISVLITIVGILALTSLPITQFPEIVPPSVTVTAQYTGANAEVLAKS
VATPLERAINGVPGMTYMSSVNTNDGVTVITVVFKVGTDPDQAAVNVQNRVAMVVDELPE
EVIRAGVMTEKEVNSMLLYLNLMSSDSTQDETFVYNFADINILKELKRIDGVGFAEIMGS
RDYAMRIWLNPNRLVAYNLSPQDVIYAINRQNVEAAPGKSGISSDKSPQMLQYVLRYTGK
FNAEDDYRNITIKAMPDGSLLKVKDVATVEFDSEDYNMVSVTDGKPSASIMIKQRPGSNA
KEVISNIKAKMAELEQTSFPPGMNYNVSYDVSRFLDASIHEVLRTLLEAFILVSIVVYIF
LQDFRSTLIPAIAVPVSLVGTFFFMQQFGFSINLLTLFALVLAIGIVVDNAIVVVEAVHV
KMHENHMGAKEATIEAMKEIGGAIAAITLVMSAVFVPVSFMSGPVGIFYRQFSLTLAIAI
VISGINALTLSPALCSIMLKPPHHNDGKKSFIQKFFDGFNRWYDNLSFKYADLLKKIVGR
KSLTFVILAVFFFGTYGISYILPTGFIPTEDQGMIYVNVTTPPGATVERTKVVLDQVQEA
LLPYDEVETVSTLAGYSLLTETAGASYGMGMINLVNWEGRDASVPELIQKYQDKISHISD
AEIQFFSPPTVPGFGNASGFELRLLDKTGTNLELTARTTEEFVKALNEREELQEVFTNFN
PNFPQYILHVDHDKAAKLGIAVDDAMQTLQSYIGSFYASNFIRYGQMYKVMVQADPSYRT
HPESMLDMYAKSETGDMVPYSNFVHLERVFGPEQLTRYNMFTSAMINGEAADGYSSGDAI
KAVEETALKVLPRGYQIDWSGMTREEIESGNQAIYIFMICLLFVYLILAAQYENLFLPLA
ILLSLPVGVFGSFFFLKLLGLENNIFAQVSLVMLIGLLGKNAILIIEIAIQNRNKGLGII
ESAIKGGVERLRPILMTSFAFICGLIPLTIASGAGAIGNRTIGTAAAGGMLIGTLFGVII
IPGLYVIFETLSSYASNKKEYKTQKLAHNEVR
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaactgtttataaaacgaccaatactatcagctgtaatatcagtattaatcacg
atcgtaggtatactagcacttacatcattaccaataacccaatttcctgaaattgtgcct
ccgtcggtaactgttactgcacagtataccggagcaaacgcagaggtgttagcaaagagt
gtggcaacacctcttgaacgtgcaatcaatggtgtacccggcatgacatatatgtcttcg
gtaaataccaacgatggtgttacagttattactgttgtatttaaagtaggaactgatccg
gatcaggcagcggttaacgtgcaaaaccgggtagcaatggtggtagatgagctaccagaa
gaagtaattcgggctggtgtaatgacggagaaagaggtaaatagtatgttactttacctc
aatttgatgagtagtgatagtacccaagacgaaacatttgtatataactttgccgacatc
aatatacttaaagaattaaagcgtattgatggggtaggttttgcagaaattatgggttct
agagattacgcgatgcgaatctggttgaatccaaacagattagttgcttataatctttcg
cctcaagatgtaatttatgctattaataggcaaaatgtagaagcagctcccggtaaatca
ggtattagttctgataaatctccacagatgctccaatatgtgttgaggtatacaggtaaa
tttaatgctgaagacgactatagaaatattactataaaagctatgcccgatggttctttg
cttaaagtgaaggatgtagctacagtagagtttgactcagaagattacaacatggtatct
gttacagatggcaagccttcagcttctatcatgattaaacagcgaccaggttctaatgct
aaggaagtaattagcaatattaaggcgaagatggcagagttggagcaaacatcttttcct
ccaggaatgaactacaatgtgtcttatgatgtatcaagatttttggatgcatctattcat
gaggtacttcgcacattattagaagcatttattcttgtatcaattgttgtttatattttc
cttcaagattttagatcaacattaattccggcgattgctgttccggtttcacttgtggga
acattctttttcatgcagcaatttggtttttctatcaatttgttaactctttttgcactt
gtactggcaattggtattgtggtagataatgctattgttgtggtggaggccgtccatgta
aagatgcacgaaaatcacatgggagctaaagaagcaacgattgaagccatgaaagaaatt
ggtggtgcaattgctgcaattaccttggtaatgtcggcagtgtttgtaccagtaagtttt
atgtctggcccagtaggtattttctacagacagttctcattaactttggctatcgcgatt
gtaatttcaggtataaatgcacttacactttcccctgcattatgtagtataatgttgaaa
ccgccacatcataatgatggaaagaaaagttttatccagaaattctttgatggctttaac
agatggtacgacaatctttcatttaaatatgcagatctactaaagaagattgtaggtaga
aagtcattaacttttgtaatacttgcagtattcttttttggaacatacggcatatcgtac
atattgccaactggctttatcccaacagaagatcaagggatgatttatgtaaacgtaacc
actcccccgggggcaactgttgaaagaacaaaagtggttctcgatcaagtacaggaagct
ttactgccatatgatgaagtggaaacagtatcgactttggccggttacagtttattaact
gaaactgctggtgcttcttatggcatgggtatgattaaccttgtaaactgggaaggacga
gatgcttcggtgccagaattaattcagaaatatcaagacaaaatttctcatatttcggat
gctgaaattcagttcttctctccaccaacggttccaggttttggtaatgccagtggtttc
gaacttaggttgttagataaaacaggtactaatctggaattaactgccagaacaacagag
gagtttgttaaggcattgaatgaaagagaagaattgcaagaagtatttacaaacttcaac
cctaatttcccccagtatattctacatgtagaccacgataaagctgcaaaacttggaatt
gcggtagacgatgctatgcaaacactccaaagttacattggtagtttttatgcatctaat
tttattcgttatggtcaaatgtataaggtaatggttcaggctgatccaagttatcgaact
catccagaatcaatgctggatatgtacgccaagagtgaaactggtgatatggtgccatat
tcaaactttgtacatttagagcgtgtgtttggcccagagcaattaacaaggtataacatg
tttacttctgcgatgattaatggtgaagcagcagacggatatagtagtggtgatgccatt
aaagctgtagaagaaacagcattgaaagttttaccaagaggttatcagatagattggtct
ggtatgacaagagaagagattgaatctggaaatcaggcaatctatattttcatgatttgt
ttgctatttgtgtacctgattttagcagcacaatatgagaatctctttttaccattggca
atcttattatcattaccggttggtgtgtttggctctttctttttccttaagttattagga
ttagaaaataacatttttgctcaagtttctctggttatgcttattggtttattaggtaaa
aatgcaattctaataattgagatagccattcaaaaccgaaataaaggtttaggaattatt
gaatcagccattaaaggtggagtagaaaggctacgtcctattctaatgacctcttttgcc
tttatatgtggtctaattccactaacaatagcctcaggtgcaggcgcaattggtaacaga
actattggtacagctgctgcaggaggaatgctaataggtacattattcggtgtaattata
atcccaggattatatgtaatattcgagacactgtcatcatatgctagtaacaaaaaagaa
tataaaacacagaagttggcccacaatgaagttcgataa
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