Chondrinema litorale: OQ292_27560
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Entry
OQ292_27560 CDS
T09098
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_27560
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_27560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_27560
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_27560
Transporters [BR:
clit02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OQ292_27560
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_27560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Col_cuticle_N
Motif
Other DBs
NCBI-ProteinID:
UZR97768
LinkDB
All DBs
Position
unnamed6:complement(52048..55164)
Genome browser
AA seq
1038 aa
AA seq
DB search
MSISEIAIKRPLLIVVIFTSLILFGVMSYFKLNYNLLPKLAVNVVSVTTIYPGASAAEVE
TSVTKKLEDAFASVEGVDQINSTSQEGVSQITVNLKTNADLDQAERDIQRKADQASSELP
DDIDRPLVSKVNLDETPVIRAGVTSTKSPRALYDLIDKEIKPILQNLEGVGQVNIIGGDE
RQIQVNISPEKLKSYHLNIDQVSQAISKANRSFPAGNVETRTNTVSIRFDANVTSADQIK
RLIVSNNRFSTVYLEDVAEVIDATADATAINHINGIPSIGVQVIKQSDANAVNVSDLVKG
KFEALEKEYTDAELDFVVSSDQSTYTLASAHAVMEDLGLAVIIVGIVMLAFLHSLRSSMF
VMVALPCSMIPTFIAMYFFGFSLNMMTLMALSLVVGILVDDSIVVLENIYRHMEMGSERR
KAALEGRNEIGFTALAITLVDVVVFLPLAISGGTIGQLLKEFSLVVVFSTLMSLFVSFTI
TPMLASRFGKLEHLTKDTLWGRIILAFESFINTIKEDYGKLLALMLNKKRWLLSGVFLLI
IASFMLVGFGFIGAAFTPETDQGEININLELDPTASIYQTNLLTQQAEKFILEQPEVIRV
FSSVGFVSGSVQGASNTSNMAQLTISLVDKSERKNSVQEFGLEIQRKLTGLLPGAKVTSS
AVSIASSGTRYPVQLAVLGLDLKKVRIAANQIKEIVASVPGTKFVELSVKNQKQEITVNL
DRDKMTLLGLDASQVGGVIQNAFSGNDQSKLKDNGNEYDINISLDPYYRSNIDDVRNLSF
TNSEGQTFLLSQFAEVKIVMGESVLQRTDRIGSINVQCNVIGRPVGSVNAEIQEKIEAAD
LPSAISIEYLGDAKNQGDAFGSLGLALISAIILVYLIMVALYESMVYPFVVLFSIPVALI
GALLALALTMETLNIFSIIGMIMLLGLVSKNAILIVDFTNQLKAEGKSVRDALIEAGKER
LRPILMTTLAMILGMLPIAIASGPGAETKNGMAWVIIGGLTSSMIFTLFVVPAMYQIIES
VKNRFQKDSNTSMNTQTI
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtctatttcagaaattgccataaaaagaccactattaatagtggtgatatttacctca
cttatcttatttggagtaatgagttacttcaaactgaattacaatttactgcctaaacta
gctgtaaatgtagtgagtgtaacaaccatttatcccggtgcatctgctgctgaggtagaa
acctctgttacaaagaaactagaagatgcctttgcttcggtagaaggtgtagatcagata
aactcaacttctcaagaaggagtttcacaaattacagtaaacctaaaaaccaatgcagat
ttagatcaggcagagcgcgatatacagcgtaaagcagatcaagcatcgagcgaattacct
gatgatatagataggccactagtgtcaaaagtgaatttagatgaaactccggtaattcga
gccggggttacatctacaaaatctcccagagctttatacgacttaatagataaagaaatt
aagcctattcttcaaaacttagaaggggtggggcaggtcaatataattggtggagatgaa
agacagatacaagtaaacatctctcctgaaaaactgaaaagttatcatcttaatatagat
caggtttctcaagcaataagtaaagcaaaccgctcatttccagcaggtaatgtagaaacc
agaactaatactgtttccattagattcgatgccaatgtaacttcggcagatcagattaaa
agacttattgtttctaacaatagattcagtactgtttatttggaagatgtggcagaagtg
attgatgcaacagcagatgctacagcaattaaccatattaatggaataccttctatcggg
gtgcaggtaatcaaacaaagtgatgccaatgcggtaaatgtaagtgatttagtaaaagga
aaatttgaagcacttgaaaaagaatacacagatgcagaactagactttgttgtatcaagt
gatcaaagtacttatacactagcttcggcacatgctgtaatggaagatttgggactagca
gtaattattgttggtatagtgatgttggcgtttttgcatagtttaagaagctctatgttt
gtaatggtagctttaccatgttctatgattccgacctttatcgccatgtacttttttggt
ttctctctgaacatgatgaccctaatggcattgtcactggttgtaggtattctagtagat
gattctattgtagtactcgaaaacatctaccgccatatggagatgggttcggaaagaaga
aaagcggctttagaaggtagaaacgaaattggatttacagctctggcaattacccttgtt
gatgttgtggtgtttttaccattagcaattagtggaggtactataggacaactattaaag
gagttttctttagtagtagttttttctacgcttatgagtttgtttgtttcctttaccata
actccaatgcttgccagtagatttggtaagttggaacaccttaccaaagacactttgtgg
ggtagaatcatcttggcttttgaaagctttatcaataccattaaagaggattacggaaag
ttgttagcgctcatgctgaataaaaagagatggttactttctggtgtattcttgctcata
attgcttcatttatgcttgtaggttttggttttattggtgctgcatttacaccagaaacc
gatcagggagaaatcaacatcaacctagaattagaccctaccgcttctatatatcaaacc
aatttgcttactcaacaagcagaaaagtttattctagaacaaccagaagtgataagagta
ttttctagtgtgggttttgttagtggtagtgtgcaaggagctagcaatacgagtaacatg
gctcaacttacgatttcattggttgataaaagtgaaagaaaaaattcagtacaagaattt
ggtcttgaaatacaacgtaaacttacaggcctattaccaggagccaaagtaacatcttcg
gcagtttcgattgctagttctggtactcgttatcctgtacaactagcagtgcttggttta
gatttaaaaaaggttcgaatagcagcaaatcagataaaggaaattgtagcttcagtacca
ggaaccaaatttgtagaattatcagtaaaaaatcagaaacaagagattactgtaaatcta
gatagagataaaatgactttacttggcttagatgccagccaagtgggtggtgtaattcaa
aatgcttttagtggaaacgaccagagtaagcttaaagacaatggaaatgaatacgacatc
aacattagtttagacccttattaccgctcaaatattgatgatgtaagaaacctttctttc
acaaatagcgaaggacagacatttcttttgagtcagtttgcagaagtaaaaatagtaatg
ggcgaaagtgttttgcaaagaacagacagaattggatctatcaatgtacaatgtaatgta
attggccgtccagtgggttctgtaaacgcagaaattcaagagaagattgaagcagcagat
ttaccgtctgctatttctatagaatacttgggtgatgccaaaaatcaaggtgatgctttc
ggtagtttgggcttagctttgatttcggctatcatccttgtttatcttattatggtagca
ctgtatgagagtatggtttatccctttgtagtattattttcaataccagtagcattaata
ggtgctttgttggctttggcattaaccatggaaacactcaatattttttcgattatcggt
atgattatgctattgggactggtatctaaaaatgcaatattaattgtcgattttaccaac
cagctaaaagccgagggcaaatcagtgagggatgcattaatcgaagcgggcaaagagcgt
ctaagacctattttgatgactacccttgccatgatattgggtatgctccccattgctatt
gccagcggccctggtgcagagacaaaaaatggtatggcttgggtaattataggtggttta
actagctcaatgatatttacattatttgttgtaccagctatgtatcaaataattgagtct
gttaaaaacagatttcaaaaagactcaaacacttcgatgaatactcaaaccatataa
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