Chondrinema litorale: OQ292_27565
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Entry
OQ292_27565 CDS
T09098
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_27565
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_27565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clit03036
]
OQ292_27565
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_27565
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_27565
Chromosome and associated proteins [BR:
clit03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
OQ292_27565
Transporters [BR:
clit02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
OQ292_27565
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_27565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
CusB_dom_1
IL11
Phage_GP20
Methyltransf_15
MscS_porin
DUF2118
ABC_tran_CTD
YajC
Motif
Other DBs
NCBI-ProteinID:
UZR97769
LinkDB
All DBs
Position
unnamed6:complement(55175..56236)
Genome browser
AA seq
353 aa
AA seq
DB search
MKRKHIIWIICIVLLGLMGLQLFANKQKIDEKSDVQDTEPILIPVKTDTITEIPVNLSII
KTGNLAPFKESTVLLPIGGIVKQINFELGDKVRNGQTLAVIDSRTNQLELDKVETQIAKL
KNDLEIYQELYEGKAATKEKVRELQQSYDEAVNQAKQLKEQIADASVKAPISGIISSKSL
EAGGFANTGTELTSIVNLSIVKVEVSLTETEAYQVTEGQKVKITTNVYPDKVFTGKLTFI
SPQADAAHNYAAEIRLENTGNTILRAGTFVYADFSKKLEDSILALPREALMESLQKATVY
VVNKDQKVELKEIKTGREIKGQVEVLQGLKKGDVVVTTGQINLEDGTEVRVAN
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaaacatataatctggatcatttgtattgtattacttggattaatgggttta
cagctctttgccaacaaacaaaaaattgatgaaaagagtgatgtacaagatactgagcca
atattaattccagtaaaaacagataccattactgagatacctgttaatttaagtatcata
aaaacaggaaatttagctccatttaaagagagtactgtgttattacctattggtggtata
gttaaacaaatcaactttgagttaggcgataaagtaagaaacggccaaacactggcagta
atagatagccgaaccaatcagttggagttagacaaagttgaaacccaaattgccaaacta
aaaaacgatcttgaaatctatcaggagttgtacgaaggcaaagcagccactaaagaaaaa
gtaagagagcttcaacagagttacgacgaagctgtaaaccaagccaagcagttaaaagag
caaattgcagatgcctcagtaaaagcaccaatatcaggaattatatctagcaaatctttg
gaagctggcggttttgccaataccggaacagagcttacttcaatcgtaaacttgtctata
gtaaaagtagaagtgagtcttacagaaacagaagcatatcaggtaacagaaggacagaaa
gtgaagattactactaatgtttatccagacaaagtgtttactggcaagcttacttttata
agcccacaagctgatgcagcccataactatgcagcagaaataagattagagaacacagga
aataccatactaagagcaggcactttcgtatatgcagatttctctaaaaaattggaagac
agcattttggctttacctcgcgaagctctaatggaaagcttgcaaaaagcaactgtatat
gttgtaaacaaagatcaaaaagttgagctcaaagagattaagactggtcgagaaattaaa
gggcaagtagaagtactacaaggcttaaaaaaaggcgatgtggtagtaactactggccag
attaacttggaagacggaacagaagtacgagtagcaaattaa
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