Chondrinema litorale: OQ292_32150
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Entry
OQ292_32150 CDS
T09098
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_32150
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_32150
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_32150
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_32150
Transporters [BR:
clit02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OQ292_32150
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_32150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
UZR98664
LinkDB
All DBs
Position
unnamed11:complement(9027..12293)
Genome browser
AA seq
1088 aa
AA seq
DB search
MDLIRFALRKPITILVLVAGLFFFGYKAVNNIKIDIFPQLDLPVIYISHPYNGYTPEQME
TFFGKRYVNILLFVNGIKAIETKNIQGLTMMKISFYPGTDMAKAAAEVSAFSNRLQVAFP
PGSSPPFIIRFDASTLPVGQLVLSSDQRTNNELLDMANIYVRSTFTSIPGLVSSPPFGGN
VRTVVIKADPRLLRQHNLTPDQLVEAMRLNNITSPSGNVRIGDTNYILPTNTLIETVEDF
QNIPIFKGGVQNLYMRDVATIEDGADVTSGYALVNGRRSVYLSIAKSADASTWEVVQNLK
KAMPAMQAQLPEDVSLSYEFDQSSYVINSVESLMHEGIIGAVLTGIMVLLFLGDPRGALI
VVLTIPTSIISAVLFLDLFGQTINIMTLSGLALAIGILVDESTVTIENIHQHLDMGKPKS
LAVWDACKEIAFPKLLILFCILAVFAPAFTMSGIPGSLFLPLALSIGFSMTISYFLAQTF
VPIMANWLIKGKHDKENDAEVFADSHMEDEDDTWSQKAMLVEREDSNMDGKIDLMERLRM
RYLKFIKRMIPYRKPIVGAYILIASALVVLMISSIGRDVLPKVNSGQFQIRLRLPDGTRI
ERTEEQTIKLTEAIKELVGEENFSVSSGYVGLHPQLFSISPIFLWMAGPHEAVLQVALAH
GYEVELDELKDNIREIAADINSQMILSFEPIELTDKILSQGSPTPIEVRFSGRVKKNNEE
YAKKIIPELKKIPYLRDIQIGQSINYPVINIEIDRIKAAQLGIDVNNIARSLVASTSSSR
STEKNVWIDSKSNNSYNVQVQIPESKMNSIEDISEIPLLKNASRPVLGDIATFKRSTSYG
EADDLGAMPMLTVTANISDIDLGTAADDVQAAIDRLGELPRGLNVELIGLSKTLIETLDS
LQNGLVVAILVIFLMLAANFQSFKVSAIVLATVPAVLLGSLVLLMLFGSTLNLQSYMGII
MSVGVSISNAVLLITNAEQLRMHSGDAFLAAEEAAALRLRPIIMTALAMVVGMVPMAIGM
GEAGDQSSPLGRAVIGGLVASTFAVLFILPLAFAWGQEKTTIQSVSLDPEDEESIHFIPN
LHTKSPKV
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggatttaatacgttttgcattacgaaaacccatcactattctcgtactagttgccggg
cttttctttttcggttacaaagcggtaaataatataaagattgatatttttccccagctc
gatctgcctgttatctatatctcgcacccatacaatggttatactcccgaacagatggaa
actttcttcggaaagcggtatgtaaacattctgctcttcgtaaatggtatcaaagccatc
gaaacgaaaaacattcagggtttaaccatgatgaaaattagtttctatccgggaacagat
atggcaaaggctgctgccgaagtaagtgctttttcaaatagactccaagtcgcatttcct
ccgggatcgagtccaccttttatcattcgatttgatgcttctaccctaccagttggccag
cttgttttaagtagcgatcagcgaacaaacaacgagctacttgatatggcaaatatctat
gtgcgttctacatttacttctattccgggtttggtgagttcgccaccttttggaggtaat
gtgagaacagtcgttataaaagctgatcctcgattgcttcgtcaacacaacctcacacca
gatcagctagtggaagcaatgcgattgaataacatcacttcgccttctggtaatgtgcgt
attggagacaccaactatattttgcctaccaatacattaatagaaacggtagaagatttt
cagaacattccaatttttaaaggaggcgttcagaacctttatatgagagatgtggccacc
atagaagatggtgccgacgtaacatcaggttatgccttggttaatggccgccgctctgtt
tacttgagtattgcaaaaagtgctgatgcttctacatgggaggttgttcaaaacctgaaa
aaagccatgccagccatgcaagctcaattaccagaagatgtatctctgagttacgaattt
gatcagtcttcttatgtaattaactcagtagaaagtttaatgcacgaaggtataattggt
gcagtacttacaggaataatggtattgcttttccttggtgaccctagaggagcattaatt
gtggtgcttaccatcccgacttcaattatttctgctgttttgttcctcgatttattcggg
caaaccatcaacataatgaccttgagtggtttggcactcgccattggtattctggtcgat
gaaagtacagtaaccattgaaaatattcaccagcatctcgatatgggtaaacccaaatcg
ttggcagtttgggatgcttgtaaagaaattgccttccctaaattacttatcttattctgt
attttagcggtgtttgctccagcatttactatgtctggtattccgggttctttattcttg
ccattagcattgtctatcggttttagtatgacgatctcgtacttcctcgcacaaaccttt
gtgccgatcatggcaaactggttaattaaaggaaagcacgataaagaaaatgatgctgag
gtttttgctgattctcacatggaagacgaagacgatacatggagccaaaaagccatgtta
gtagaaagggaagacagcaatatggatggtaaaatagacttaatggagcgactcagaatg
cgctacctcaagtttattaaaagaatgattccatacagaaaaccaattgttggagcatac
atattaattgcgtctgctttggtcgtgttgatgatttcttcaattggtcgcgatgtactt
ccaaaagtaaatagtggtcagtttcagatcagactacgtctaccagatggtacaagaatc
gaaagaactgaagaacaaaccattaaacttaccgaagctattaaagaattggtgggggaa
gaaaacttctcagtatcttcaggatatgttggcttgcatccacagctattctctattagc
ccaatattcttgtggatggctgggccgcacgaagctgtacttcaagtagcacttgcacat
ggttatgaagtagaactggatgaattaaaagacaacatccgcgaaattgctgctgatatt
aacagccaaatgatactttcttttgaacctatcgaattaacagacaaaattttaagtcaa
ggttctcctactccaattgaagtgagattctctggaagggtaaagaaaaacaatgaagag
tatgccaaaaagattattcctgaactaaagaagattccttatttaagagatattcaaatt
ggccagtcaatcaattatccagttattaatatagaaatagacaggataaaagccgctcag
cttggcattgatgtaaataacattgctcgttcgttggtagcttctacttcttcatcaaga
agtacagagaaaaacgtttggatagattcaaaatcaaacaacagctacaacgtgcaggtg
caaattcctgaaagtaagatgaacagcattgaagatatttctgagattcctttgcttaaa
aatgcgtcaaggcctgtattaggcgacattgccacatttaaaagaagtacttcttatgga
gaagccgatgatttaggggcaatgccaatgttaactgttactgctaacataagcgatatt
gatttaggcaccgctgctgatgatgtacaagctgctattgataggcttggagaattgcca
agaggactaaatgttgaattgattggcttgagcaaaaccttaattgaaacactagatagt
ttgcaaaatggtttggttgtagcaattttagtaatcttcttaatgttggctgccaacttc
caatcttttaaagtttcggcaattgtactggcaactgttcccgcagtattattaggctcc
ttagttttattgatgctttttggctcaactttgaacttacaatcttatatgggcattatc
atgtcagtaggtgtttctatatctaatgctgtattgttaattaccaatgcagagcaatta
cgcatgcattctggcgatgcctttcttgcagcagaagaagctgccgcactccgactaaga
ccaataattatgacagccctagccatggtagtaggtatggtaccaatggctatcggtatg
ggtgaagcaggagatcaatcttctccacttggaagagctgtaattggaggtctggtagca
tccacctttgctgtattgtttattttaccacttgcatttgcttggggccaagaaaaaaca
acaatacaaagtgtttcactcgatccagaagacgaagagagtattcactttatacccaac
ttacatacaaaatcaccaaaagtttaa
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