Chondrinema litorale: OQ292_34645
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Entry
OQ292_34645 CDS
T09098
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_34645
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_34645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_34645
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_34645
Transporters [BR:
clit02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OQ292_34645
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_34645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF4998
Motif
Other DBs
NCBI-ProteinID:
UZR99148
LinkDB
All DBs
Position
unnamed14:complement(25275..28445)
Genome browser
AA seq
1056 aa
AA seq
DB search
MLEKIISRPVLTLVISILLVLAGAVSMTTLPVERFPEIAPPSVSVQVYYPGGNAETVAKS
VLLPIEEAINGTENMTYANSTATNSGRGRVTVYFKPGTDPNTAAVEIQNRISSVTQQIPP
EVTASGIQVMKRMKGSIMTINIFSENGVYDETFLNAYTRINVRRELKRVEGLAEASILRS
RDYAMRIWLDPNKLALYELTPKDVYNQILDQNFEAAPGKFGENSDELFEIVLKHEGRFDE
DEEYGNLVVKADKTGSLLHLRDVARIEFGADNYTSENRLDGKPAVTIDIVQLSGANAVEI
DKRVREILEEQAKVFPDGMDYEISYSVRDQIDQSMHQVVQTLFEAFFLVFLVVFIFLQSF
RITFITAVSIPISLVGTFFFLSLVGVSMNVLSMFSLVLSIGIVVDNAIVVMEAIHEKMTH
HKMPAKEAVKAAMSEITGAIISITIVIAAVFLPIGFMEGPVGIFYKEFAYTIIFAVLISA
VNALTLGPVLTRLFFKDRGDKVRKTPGFVGKITENSVVQKVKRSRERGLEKFDDLFERTT
KKYISMVKWSIHNKWLSLLGLVLVFVATGYLMSSTPSGFIPTEDDNFLIMSLRMPEGSSL
HRTNEALRKADSILQVEAPVAAVNTVSGFNVVDNANSPSSGMAYIKLKDGPERGDVQKID
EVVKMLTERLLQIDGASINVYPRPTVQGFGDFDGVQVMLQDRTGGDLGEFGQMVNEFIAQ
VSQQTEVENAFTSFNPNYPQSKLVIDYEKAKSLGVSIKDMMFTIKSYFGRTQSGDFNRFS
RQYGVFMQADIQFREQPKEFNNIFVKNDEGKMVPINTIVKLEQAFGPETLNRYNLYNAAK
INVTPAKGYSTGDVINLIEELADSRLPASLSYEWTSMSLEEKNSGGESTIIFIMSIILVY
FILAAQYESFWLPLAVILSIPTGIVGVFLAIKIAGIENNTYVQVGIIMLIGLLAKNAILI
VEFAAQKRRAGMPVLEAVTEASALRLRSIVMTSLAFTVGLIPLMFAHGASAQGNKSVSIG
TAGGMLSGIILGVLIIPVLAYIFQSLQDKFSMEFND
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaaaaattatctcaagaccagtcttgacactggttatctctatactattggtt
ctagcgggagctgttagtatgactacgctacctgtagaacgttttcctgaaatcgcccct
ccaagtgttagtgtgcaggtatactatcctggaggtaacgctgaaactgtcgcaaaatct
gttttattgcctatagaagaagcaataaacggtactgagaacatgacttacgctaactct
acggctactaactctggtcgtggtagagtaactgtatattttaagccgggtacagacccc
aacactgcagcggtagaaattcaaaaccgtatttccagtgtaacccagcaaattccacca
gaagtaactgcttcaggtatccaagtaatgaaaaggatgaaaggtagtatcatgaccatc
aacatctttagtgaaaacggggtgtatgatgaaacctttctaaatgcttatacacgtatt
aatgttagaagagagctaaaaagggtagaaggtctggcagaagcaagtattcttcgatct
agagactacgccatgagaatctggctagatccaaacaagctagcattgtatgagctcaca
ccaaaagatgtttacaatcagatattagatcaaaactttgaagctgcaccgggtaagttt
ggtgaaaactccgatgagcttttcgaaattgttttgaaacacgaaggtcgttttgatgag
gacgaagaatacggaaatttagtagttaaggcagataaaacgggttctttacttcactta
agagatgtagcaagaatcgaatttggtgcagataactataccagtgaaaatagactagat
ggcaagccagcggtaaccatagatattgtgcagttgagtggtgcaaatgccgtagaaatt
gacaagagagttcgtgaaattctcgaagagcaagctaaggtttttcccgatggcatggat
tacgaaatctcatacagtgtaagagatcagattgaccagtctatgcaccaagtggttcaa
acactttttgaagcattttttcttgtgttcttggttgtgtttattttcttgcagagtttc
agaattacatttattacagctgttagtatcccgatttcattggtaggtaccttcttcttt
ttaagtttggttggtgtctcaatgaacgtacttagtatgttctcgctggtactttcgata
ggtattgtggtggataacgctattgtggttatggaagccatccacgaaaagatgacgcac
cataaaatgcctgctaaagaagctgtaaaagcagctatgagtgagattaccggtgcaatt
atttcaattaccattgtaattgcagctgtgttccttccgattggttttatggaaggtccg
gtaggtattttctacaaagagtttgcttataccattatttttgcggttcttatctcagcg
gtaaacgcacttacattaggccctgtacttacaagattgttctttaaagatagaggtgat
aaagttcgtaaaacgccaggttttgtaggtaaaattacagaaaacagcgtagtgcaaaaa
gtaaagagatcaagagaaagaggattagaaaaattcgacgatcttttcgaaagaactact
aagaaatacatttcaatggtgaaatggagtattcataataagtggttatcacttttaggt
cttgtattagtatttgttgctacaggctaccttatgagctccacaccaagtggatttatc
cctacggaagatgataacttcttgattatgtcattaagaatgccggaaggttcatcatta
cacagaaccaatgaagcattaagaaaagcagattctatccttcaagtagaagcaccagtt
gcagcagtaaacacagtatctggttttaatgtggtagataatgcaaacagtccttcttct
ggtatggcatacatcaagttgaaagatgggcctgaaaggggagatgttcaaaagattgac
gaagttgtgaagatgctaaccgaacgtcttttacagattgatggagcaagtatcaacgta
tatccgagaccaacagtacaaggttttggtgactttgatggtgtgcaggtaatgttgcaa
gatagaactggtggtgatcttggagagtttggtcagatggtgaacgagtttattgctcaa
gtatctcagcagaccgaagtcgaaaatgcatttacatcatttaaccctaattacccacaa
tctaaattggtaatcgattatgagaaagcaaaaagtttaggtgtgagtattaaagatatg
atgtttaccatcaaatcatatttcggacgtacacaatctggagattttaacagatttagc
cgtcagtatggtgtgtttatgcaggctgatattcagtttagagagcagccaaaagagttt
aataacatcttcgtgaaaaatgatgaaggtaaaatggttccgattaataccattgtaaag
ttggaacaagcatttggacctgaaacattaaacagatacaacctgtacaatgcagcaaaa
atcaacgtaaccccagcaaaaggttatagtactggtgatgtaataaatttaatagaagag
ttagcagatagcagactaccagcaagtttaagctacgagtggacaagtatgagtttggaa
gaaaagaactctggtggtgaatctactattattttcattatgagtattattttggtgtac
tttattcttgccgcacagtatgagagtttttggttaccattagccgtaatactttctata
ccaacgggtattgttggagtattcttagccatcaaaatagcgggaatcgaaaacaacact
tatgtgcaggtaggtatcatcatgttaattggattattggcaaagaatgcaattctaatt
gtagaatttgccgcacaaaagagaagggcaggaatgccggtactagaagctgtaacagaa
gctagtgcgcttcgtctaaggtcaattgttatgacctcattggcctttactgtgggatta
attccactgatgtttgcgcatggcgcttcagcacagggtaataaatctgtaagtattggt
acagcaggggggatgctttctggaattatattgggtgttttaattatcccggtattggca
tacatattccagagtttgcaagataaatttagtatggaatttaacgattga
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