Chondrinema litorale: OQ292_36765
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Entry
OQ292_36765 CDS
T09098
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
clit
Chondrinema litorale
Pathway
clit01501
beta-Lactam resistance
clit01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
clit00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
OQ292_36765
01503 Cationic antimicrobial peptide (CAMP) resistance
OQ292_36765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clit02000
]
OQ292_36765
01504 Antimicrobial resistance genes [BR:
clit01504
]
OQ292_36765
Transporters [BR:
clit02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
OQ292_36765
Antimicrobial resistance genes [BR:
clit01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
OQ292_36765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Phage_tail_terminator_6
Motif
Other DBs
NCBI-ProteinID:
UZR99424
LinkDB
All DBs
Position
unnamed17:complement(77500..80694)
Genome browser
AA seq
1064 aa
AA seq
DB search
MEEGISGKVAHFFINSKLTILLMVALMIIGVYSSSLIPREEEPQINVPMADIMIGYPGAS
PAELESRVVKPLEKIIGNIKGVEHIHSMAMNGMAMIIVQFYVGEDIERSYVKLYDELNKH
QGMFPEGVYQPLVKTRSIDDVPMLGLTLWSENYDDFQLRAIAEEVTSEIEKVKDVAITKV
IGGRNRQLKVVLDKDKMAENAVDALSIMQMIQANNGSSQSGSFVNNDEEYLVTTGKFLTS
AEDIENLVIGVNKNMPVYLKQVATIEDGPETPNSYVSFGYGKANEDFKGYKSEYPAVTIS
VAKVKGADAMKIADKIVDQIDLLKLNLIPNDVHVSVTRNYGETASHKVGELLMHLGVAIL
AVTVLVMLAMGWRGGLVVFFSVPLTFALTLFSYYILGYTLNRITLFALVFVVGIVVDDSI
IIAENMHRHFKMKRLPFKQAAIFAINEVGNPTILATFTVIAAILPMAFVSGMMGPYMSPM
PIGASIAMMLSLFVALTVTPYLGYHLLREKDEQEHKEEHNLETSVIYKIYKKIEQPMLDS
SAKRWVMLGITLFLLVGSVLMFFTKSVAVKMLPFDNKNEFQVVIDMPEGTTLERTAAVTK
EVAQYLSTIPEVVDYQNYIGTSAPITFNGLVRHYDNRGGSNMADIQVNLLYKEDRDLQSH
DIAKLVRPQVQQIAKKYGANIKLVEVPPGPPVLSTLVAEVYGGPNYDEQIMVADQVKSIL
ENTDDIVDIDWMVEDAQTEFKLEVDREKAMLNGIAPQQVVGNLTYILRDLPISNLYDEYA
NDNVGIVLSLDDSDKSNLQDIQSLKVKGKQGNVVPVSDLVKVKEASLQKTIYRKDQKRVV
YVLADMAGALESPVYAILGMEQKLKEMSLPKGYEVKELYMEQPTDETDFTVKWDGEWQIT
LEVFRDLGAAFMVVIIVIYMLIVGWFQNFKTPMVMMIAIPLSLVGIVLGHWLLGAFFTAT
SFIGMIALAGVMVRNSVLLIDFIEIRLNDGIPLKQAIIDAGAVRTTPILLTTGAVVIGAS
IILFDPIFQGLAISLVAGAIVSTLLTLIVVPLIYYMTEKTKWEN
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggaatatcaggtaaagtcgcccattttttcatcaactcaaagcttaccatt
ttattaatggtagcactgatgattatcggggtgtatagttcttcgttaattccaagagaa
gaagaacctcagataaatgtaccaatggccgatattatgatcggttatccgggggcgagt
ccggcagaattagaaagcagagtagttaagccgctagaaaaaatcataggcaacataaaa
ggagtggagcatattcactcaatggcgatgaacggcatggctatgattattgtgcagttt
tatgtgggtgaagacattgaaagatcttatgtgaaattgtacgacgagttgaacaaacat
cagggtatgtttccagaaggtgtgtatcaacctctagtaaaaaccagatcgatagacgat
gtaccgatgttaggcttaacgctttggagtgaaaactacgacgatttccaactaagagcg
attgccgaagaggttacttctgagattgaaaaagtaaaagatgtagcgattacgaaagta
attggtggtagaaatcgccagttaaaagtggtgttggataaggataaaatggctgaaaat
gctgtggatgcattgagtattatgcagatgattcaggcaaacaacggaagttctcaatct
ggaagctttgtaaataatgatgaagaatacttagtaactactggcaagtttttaacttct
gctgaagatatagagaatctggtaatcggtgtaaacaaaaatatgccggtatacttaaag
caggtggctacaatcgaagatggtccagaaacaccaaacagttatgtttctttcggttat
ggaaaagccaacgaagattttaaaggttacaaatctgagtatcctgcggtaaccatctct
gttgccaaagtgaaaggagcagatgcgatgaagattgctgataaaattgtagatcagatc
gatctgttaaagctaaacttgattcctaatgatgtgcatgtgagtgttaccagaaactat
ggtgaaacagcttcgcacaaagtaggtgagttattaatgcacttaggtgtggcaattcta
gcagtaactgtattggtaatgttggccatgggctggagaggtggcttagtcgtgttcttt
tcagtaccacttactttcgctttaaccttgttcagttattacattttaggttacacgcta
aaccgtatcacgctgtttgctttggtgttcgtagttggtatcgtggtagatgatagtatt
attatcgcagaaaacatgcaccgccattttaaaatgaagcgattgccatttaaacaggct
gctattttcgcgataaacgaagttggtaacccaaccattttggcaacttttacagtaatt
gcagctattttaccaatggcatttgtatcaggaatgatgggcccttatatgagtccgatg
ccgattggtgcttctattgcgatgatgttgtctctgttcgtagcattaacagtaactcca
tatttgggttatcacttactaagagaaaaagacgagcaagaacacaaagaagagcacaat
ttagaaaccagtgtgatctacaaaatctataaaaagattgagcaaccaatgctcgatagt
tcagcaaaacgctgggtaatgttaggaatcaccttatttttattagtaggttcagtattg
atgttctttactaaatcggtagctgtaaaaatgcttccttttgataacaagaatgagttc
caagtagtgattgatatgccagaaggaacaacactggaaagaactgctgccgtaaccaaa
gaagtggctcagtatctatctaccattccagaagtagtggattatcagaattacattggt
acttctgctccaatcacttttaatggattagtaagacattacgataatcgtggtggtagc
aacatggcagatattcaagtaaacttgttatacaaagaagacagagatttacaaagtcat
gatatagctaaattggtgagaccacaagtgcagcaaatagctaaaaaatatggtgcgaat
atcaaattagttgaagtaccaccgggccctccagtattatcaactttagtggctgaggta
tatggcggaccaaactacgacgagcaaataatggtagccgatcaggtaaaatccattctt
gaaaacaccgatgatattgtagatatcgactggatggtagaagatgcgcaaacagagttt
aagttagaagtagacagagaaaaagcgatgttaaacggcattgctccgcaacaagtagtt
ggaaacttaacttacatcttgagagatttaccaatctctaacttgtacgacgagtatgca
aatgacaatgtaggcattgttctttcactagacgatagcgacaagagcaatttacaagat
atccaaagcttaaaggtaaaaggcaaacaaggcaatgtagtacctgtaagcgatctagta
aaagtaaaagaagcatcattacaaaaaacaatctatcgcaaagatcagaaaagagtagtg
tatgttttagcagatatggcaggagctttagaaagtccagtttatgcgattctcggaatg
gagcaaaagctaaaagagatgagtttgcctaaaggttatgaggtgaaagaactctacatg
gaacaacctacagacgaaacagatttcactgtaaaatgggatggagaatggcaaattacg
ctggaagttttccgcgatctaggagcagcatttatggtggtaatcattgtaatatatatg
ttgattgttggctggttccagaattttaaaaccccaatggtaatgatgattgccattcca
ctttcattagttggtattgtactaggccactggttattaggtgcattctttactgcaaca
tcttttatcggtatgatcgcactagcaggtgtaatggttagaaactcagtgttattgata
gactttatcgagatcagattgaatgatggtattccattaaaacaagccataattgatgca
ggagcggttagaactacaccaattttactaacaaccggagccgttgtaatcggtgcttct
atcatcttgttcgacccaattttccagggtcttgccatctctctggtagcaggagcaatt
gtgtctactttgcttacacttattgtagtacctcttatctactatatgacagaaaaaacc
aagtgggaaaactaa
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