Clostridium sp. OS1-26: RCG18_02890
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Entry
RCG18_02890 CDS
T11102
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K22015
formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:
1.17.98.4
1.17.98.5
]
Organism
cloo Clostridium sp. OS1-26
Pathway
cloo00680
Methane metabolism
cloo00720
Other carbon fixation pathways
cloo01100
Metabolic pathways
cloo01120
Microbial metabolism in diverse environments
cloo01200
Carbon metabolism
Module
cloo_M00377
Reductive acetyl-CoA pathway (Wood-Ljungdahl pathway)
Brite
KEGG Orthology (KO) [BR:
cloo00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
RCG18_02890 (fdhF)
00680 Methane metabolism
RCG18_02890 (fdhF)
Enzymes [BR:
cloo01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
RCG18_02890 (fdhF)
1.17.98.5 hydrogen-dependent carbon dioxide reductase
RCG18_02890 (fdhF)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
SIS
Motif
Other DBs
NCBI-ProteinID:
WML35716
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Position
complement(580485..582635)
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AA seq
716 aa
AA seq
DB search
MENKVLTVCPYCGAGCNLNLIVEDNKIVRAEPANGRTNEGTLCLKGYYGWDFLNDPQLLT
SRLKRPMIRKNGELQEVSWDEAINFTASKLSEIKEKYGPESIMGTGCARGSGNEANYIMQ
KFIRAVIGSNNIDHCARVUHAPSVAGLAYTLGNGAMSNGIHELDNADLIFIFGYNGADSH
PIVARRIVKAKENGAKVIVVDPRITESARIADLWLPIKNGTNMALVNALGNALINESLYN
KEFVEKHAEGFEEYKDLVSKYTPEYANEITGVQKEDIRKAMRMYSSAKNPMILYGMGVCQ
FGQAVDVVKGLAALAILTGNFGRPSVGIGPVRGQNNVQGACDMGALPNVYPGYQKVDDDD
VRRKFEEAWGVKLSNKIGYHLTEVPRITLEENKIKAYYIMGEDPVQSDPNSAEVREALEK
MELVVVQDIFMNKTALHADVILPATSWGEHEGVYSCADRGFQRFRKAIEPSGDVKPDWQI
LSEVATAMGYNMHYNNTKEIWDEMRNLCPNFTGASYERLEELGGIQWPCPDEKHPGTSYL
YEGNKFSTPSGKAKLSASEWRPPMETPDEEYPLVLSTVREVGHYSVRTMTGNCRALQQLA
DEPGYIQMNPKDAEKLRVNDQELVRISSRRGSVVARALITDRVNRGAVYMTYQWWIGACN
ELTIDNLDPISKTPEYKYCAVKIETIEDQEKAEQFVKEEYNRVRKAMNVQTEKVEA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaggtgctgacagtgtgcccttattgtggtgctggttgcaaccttaatctg
attgtagaggataataagatagttagagctgagccagcaaatggtagaactaatgaagga
actttatgcttgaaaggttattatggatgggactttttaaatgatccacaacttttaact
tctcgtcttaaaagaccaatgattagaaaaaatggagagcttcaggaagtatcatgggat
gaggctataaattttactgcttcaaaattaagtgaaataaaggaaaagtatggtcctgaa
tcaattatgggaacgggatgtgcaagaggatcaggaaatgaagcaaattatataatgcaa
aaatttattcgtgcagtgattgggagtaataacatagaccactgtgcaagagtttgacat
gctccttcagtagccggtttggcctacacattgggaaatggagcaatgtctaatgggatt
catgaactagacaatgctgacttaatatttatttttggttataatggagcagactctcat
cctatagttgctagaagaattgttaaagcaaaggaaaatggagctaaagttatagttgtt
gatcctcgtataacagaatctgctaggatagctgatttatggcttccaataaaaaatgga
actaatatggcgttagttaatgctctagggaatgcattaataaacgaaagcctttataat
aaggagtttgttgaaaagcatgcagaaggctttgaagagtacaaagacttagttagcaaa
tatactcctgaatatgcgaatgaaataacaggtgttcagaaagaagatataagaaaagca
atgagaatgtattcatcagctaagaatcctatgatattatatggaatgggagtatgtcaa
tttgggcaggcagttgatgttgttaaaggactagcagctcttgctatattaactggcaat
tttggaaggccaagcgtaggcattggaccagtaagaggccaaaataatgttcagggagcc
tgcgatatgggagctttaccaaatgtatatcctggttaccaaaaagtggatgatgatgat
gttagaagaaaatttgaagaagcatggggtgtaaagctttccaataagattggatatcat
ttaactgaagttccaaggattacattggaagaaaacaagattaaagcttattatattatg
ggagaggatcctgttcaaagtgatccaaattcagcagaagttagagaagcattagagaaa
atggaacttgtagttgtacaggacatatttatgaacaagacagcattgcatgctgatgta
atattaccagcaacatcttggggggaacatgaaggtgtttatagttgtgctgatcgtggc
ttccaaaggtttagaaaagcaatagagccaagtggtgatgttaagccagattggcaaata
ctttcagaggttgccactgcaatgggctataatatgcattataataatacaaaagaaata
tgggatgagatgagaaatttatgtccaaactttacaggagctagctatgaaagattagag
gaacttgggggtattcagtggccatgccctgatgagaaacatccaggaacttcatacctg
tatgaaggaaataaattttcaactccaagtggaaaagcaaagttatctgcttcagaatgg
agaccgccaatggaaactccagatgaagaatatcctttagttttatctacagttagagaa
gtaggtcattattccgtaagaacaatgacaggcaattgtcgtgcccttcagcaacttgct
gatgaaccaggctacatacaaatgaacccgaaggatgcagaaaagcttagggttaatgat
caggagctagtaagaataagctctcgaagaggttctgtagtagctagggcgctaattaca
gatagagttaacagaggggcagtttacatgacatatcaatggtggataggtgcatgcaac
gaattgactatagataatttagatcctatatcgaagactcctgaatataaatactgtgct
gtaaaaattgaaacaatagaagaccaagaaaaagcagagcagtttgttaaggaggaatac
aatagagtaagaaaagcaatgaatgttcaaaccgaaaaagtggaagcataa
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