Campylobacter lari RM16701: UPTC16701_0954
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Entry
UPTC16701_0954 CDS
T03550
Name
(GenBank) type I secretion system, outer membrane protein, TolC family
KO
K12340
outer membrane protein
Organism
clr
Campylobacter lari RM16701
Pathway
clr01501
beta-Lactam resistance
clr01503
Cationic antimicrobial peptide (CAMP) resistance
clr02020
Two-component system
clr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
clr00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
UPTC16701_0954
09132 Signal transduction
02020 Two-component system
UPTC16701_0954
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
UPTC16701_0954
01503 Cationic antimicrobial peptide (CAMP) resistance
UPTC16701_0954
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clr02000
]
UPTC16701_0954
02044 Secretion system [BR:
clr02044
]
UPTC16701_0954
01504 Antimicrobial resistance genes [BR:
clr01504
]
UPTC16701_0954
Transporters [BR:
clr02000
]
Other transporters
Pores ion channels [TC:
1
]
UPTC16701_0954
Secretion system [BR:
clr02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
UPTC16701_0954
RTX toxin transporter
UPTC16701_0954
Multiple protein transporter
UPTC16701_0954
RaxAB-RaxC type I secretion system protein
UPTC16701_0954
Antimicrobial resistance genes [BR:
clr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
UPTC16701_0954
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
UPTC16701_0954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
HycH
TolA_bind_tri
Motif
Other DBs
NCBI-ProteinID:
AJD04989
LinkDB
All DBs
Position
933417..934673
Genome browser
AA seq
418 aa
AA seq
DB search
MKILYLLFLPLFLLANNLKEFIDLSLNNENYLQKQLQFSKSILEQESVQNAYLPSLHLGV
SYLGSNKDRFIIEPQESLMSALSLKFLLFDGGNREAKIASMQSLKQLAHLEKENMANYMA
LSASVLYFNYLSLESIIASDKQKEITLQNQLKRLENFYQAGLASQSELESIRAKFELSSY
ELAQNELKLYELKNEIYNLSKTHFTPSFQNILQEPSAEKNKSYEIALMQEKLNLENLKID
SARAELFPKIFLQNSFSFYDMNYNPKLPHELKSTSESFLKEHGQSNRFILAFEWKIFDFS
ANQKALEAQKYTSKITQLELEKTKRKVDIELDNLLQEIEISKVKIKALNASFNAANLAFE
AIEKKYTAGLCSYVEYLNALELKYKSQSQLELAKNEHEITKARYYFAAGIDIKTKVLE
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttatatttacttttcttgcccttatttttgctagctaataatcttaaagaa
tttatagatttaagtttaaacaatgaaaattatttacaaaagcaactccaattttcaaaa
agtattttagaacaagaaagcgtgcaaaatgcttatttgccaagtttacatttaggtgtt
tcttatcttggctcaaacaaagatcgctttatcatagaaccccaagaaagtctaatgagc
gccctttcacttaaatttttactttttgatggaggtaatagagaagcaaaaatcgctagc
atgcaaagtctaaaacaacttgctcatcttgaaaaagaaaacatggcaaattatatggca
cttagtgctagtgttttgtattttaattatcttagtttagaaagtattatagcaagtgat
aaacaaaaagaaatcactctgcaaaatcaactcaagcgtttagaaaatttttaccaagct
ggacttgctagccaaagtgagcttgagagcataagagcaaaatttgagttaagctcttat
gaattagctcaaaatgagttaaaactatatgaattaaaaaatgaaatttataatcttagt
aaaacgcattttacgccttcttttcaaaatattttacaagaaccaagtgcagaaaaaaac
aaaagctatgaaatagcccttatgcaagaaaaattaaatttagaaaatttaaaaatagac
tctgctagagctgagttgtttccaaaaatatttttacaaaatagttttagtttttatgat
atgaactataatcctaaattaccgcatgagctaaaatcaacaagtgaaagctttttaaaa
gaacatggacaaagcaatcgttttattttagcttttgagtggaaaatttttgattttagt
gctaatcaaaaagctctagaagctcaaaaatatacaagcaaaatcactcaattagagctt
gaaaaaactaaaagaaaagtagatatagaactagataatcttttacaagaaattgaaatt
tctaaagttaaaataaaagcattaaatgcgagcttcaacgcagctaatttggcttttgag
gccattgaaaaaaaatacaccgcaggactttgctcatatgtagaatacctaaatgcgtta
gaattaaaatacaaaagtcaaagtcagcttgaactagctaaaaatgaacatgaaatcaca
aaagcaaggtattattttgcagctggaattgatataaaaacaaaggttttagaatga
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