Cyclopterus lumpus (lumpfish): 117745058
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Entry
117745058 CDS
T09199
Symbol
adar
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04622
RIG-I-like receptor signaling pathway
clum04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117745058 (adar)
04623 Cytosolic DNA-sensing pathway
117745058 (adar)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117745058 (adar)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
117745058 (adar)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117745058 (adar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
Period_C
RPA_C
TrmB
Motif
Other DBs
NCBI-GeneID:
117745058
NCBI-ProteinID:
XP_034408972
Ensembl:
ENSCLMG00005001707
LinkDB
All DBs
Position
16:10886788..10906913
Genome browser
AA seq
1388 aa
AA seq
DB search
MSRGRGGPLKEHYNRHPPPDSQANENYFRPGPSSLYPRAGPQQSPYSSYHNSPVRPVVPI
QPPPAPSLIPSAPPIPKRSKVDPKSEASNSSYNLNHGLDPAPNSFQYQQAEFLRGHSSEA
PQFRASPRGGGGGGGGVSDRRPSSSYQHQSGYSKYSSYPNNSSKGRREYSQDQTSVYPVS
PRGNTGPQPLNQDQFYGTNHNPYSNRQCRVPIDSVCEHFQTLSLHRDRPKRRGERFDRHS
ASRSLADSHSSKVDLTLTSDIQDQVQRTLAALRPSEGISAKLLAKKLHLPKKIVNQALYL
LARSKKASKQGLLPPEWSLCREPFRGEEDQNSKVQSPPSHLCVSSGHPPESEAKVELKTE
TAENRAQSKEEDSDAASSSSYCTSLESSDSEESQSPAKGQHQEKQHPITTSSPDPPLPTM
AEQKELVLQYLLASREATALVIAKNLGLRGTKQVNPTLYSLEKQGEVIKNSGTNPPTWEL
STHRRERMERSLKASKSSRAEGDQIPEPSRDQKRGESVFLSPLPLPPIPGLEPLPLPEGW
MPEQSRSEVSQSSFQPPSITSCQDEETNEGQWATDDIPEFLNAIRRETDAGKLAVEQANS
VGTVAVSLAAPPPQNLWAKLQEVRLKNPVSGLMEYAQYLGHDCEFLLLDQSGPSHDPRFR
MQVMLNRRLFPVAEASSKKVAKKDAAAATLRILIGESQAGPSTGDEGNTVGADQVMDVLP
DTSGQAEGAAGAFGTSSVEGMGTVEGPCQPLSRSLPGGKNPVSVLMEYSQRSGNPIEFIV
TGQAGPPHDPRFMYRVKVGENLFTEASAPSKKAARQLAAEEAVKELMADGRLQLNKPQLP
LGSSSDSDASGTATTCPSLPPLTADELRAAHEAGVGDLINHLNNNAVSGLLEYARARGFA
AEIRLVGQSGPPHEPKFTYQAKLGGRWFPPVCASNKKQGKQEAADAALRVLIGEAERAAR
TGELIPAELPVSGSTLHDQIAMLSHQRFNALTTRIQHSLLGRKILATVVMRRGEGLGTVV
SLGTGNRCVKGEELSLKGDTVNDCHAEIISRRGFVRFLYIELLKHYENTDDSIFEAVDNE
KLQIKSDITFHLYISTAPCGDGALFDKSCSEAGDEDEGHQPLFENAKQGKLRTKVENGEG
TIPVESSAIVPTWDGIQHGERLRTMSCSDKILRWNVLGLQGALLTHFLHPIYLKSITLGY
LYSHGHLTRAVCCRLARDGEAFTQSLPPPFKLNHPEVGRVSVYDSTRHTGKTKESSVNWS
FPDQQSVEVLDGTKGKLDGYGNKLCVSRVSKSNLFCLFRSVCERSGRTDLLALPCYSQAK
LLALSFQLTKQHFFRALSNHGYGAWIGKPLEEKSFESGEGNRNNGASVPVGYGSSRNGAA
VEIKPEDA
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggtagaggagggcctctcaaagaacactacaacaggcatccaccacccgac
tcccaggccaacgagaattacttcagacctggtccatcctcactctaccctagagctggc
ccacagcagagcccatattcaagttaccacaacagccctgtccgtcccgtagtgcccata
cagccacccccagctccttctctcatcccctccgctccacccataccaaagcgcagtaaa
gtggaccctaaatcagaggcctctaacagctcatataatctgaatcacggtctcgatcct
gctcccaattcctttcagtaccaacaggcagagttcctcagaggacacagctctgaggcg
ccacagtttagagccagtccacgtggagggggagggggaggaggaggggtctcagatagg
cgtcctagttcctcataccagcaccagtcaggctacagtaaatattcatcataccccaac
aacagctcaaagggtagacgggagtatagtcaggaccaaacttctgtatacccagtatcc
ccgcgcggcaacacaggccctcaacccctgaatcaagaccagttttacggtacaaaccac
aacccatactccaacagacagtgtcgcgtcccaatagattctgtgtgtgaacattttcag
actttgtcccttcatcgagacagaccaaaaagaagaggagaacggtttgacagacattct
gcctccaggagtttggcagattcacactctagtaaagttgacctaactcttacttctgac
atccaggaccaggttcagaggactttggctgctttgaggccaagtgagggtatctctgca
aaattgttagccaaaaaactgcatcttcccaaaaagatagtcaaccaagctctttacttg
ttggcgcgctcaaagaaagcctccaagcaaggactcctccctcctgagtggagtctttgc
agagaaccttttagaggtgaggaagatcaaaactctaaagtacaaagtccaccttcccat
ctgtgtgtcagctcaggacaccctccagaatctgaagccaaggttgaactaaaaacagaa
acagcagaaaacagggcacaaagcaaagaagaggactctgacgcagcatccagttcttct
tactgcacctctttagaatcatctgactctgaagagtcccagtcaccagcgaaaggtcag
caccaggagaaacaacatcccatcactaccagctcacctgatccaccacttcccacaatg
gcagaacagaaggagctagttctgcagtacctgctggcttcaagggaggcaactgctctt
gtcatagccaaaaatctgggtcttaggggtactaagcaggtcaatccaaccctctactcg
ctggagaagcaaggtgaagtcattaagaatagtggaactaacccgcccacctgggagctc
tccacccaccgcagagagaggatggaaaggagccttaaagcttcaaagagcagccgtgct
gagggggatcagatcccagaacccagtagagatcagaagagaggagagtccgtctttctg
tcgccgttaccattaccaccaataccaggcctcgagccactgccactcccagaaggttgg
atgccagagcaaagtcgtagtgaggtgtcccagtcctcattccagcccccctctatcacc
tcgtgtcaagatgaagagaccaacgaaggacagtgggctactgacgacatcccagaattc
ctcaacgccattcgcagagagacagatgctgggaaactggcagtagaacaggccaactct
gtgggaactgtagctgtgtcgctggctgctccacctccccagaacctgtgggccaaatta
caggaggtgaggctgaagaaccccgtgagtggcctcatggagtacgcccagtatctgggc
catgactgtgagttcctgctcctcgaccaatcagggccctctcacgacccacgatttcgt
atgcaggtgatgctcaacagaaggctgtttcctgtcgcagaagcttccagtaagaaagtt
gcaaaaaaggatgcggcggctgccaccctgcgcattctcatcggagagagtcaggcaggg
ccgagtacgggagacgagggaaatactgtcggtgcggaccaagtgatggatgtactccca
gacaccagtgggcaagctgaaggcgcagcaggggcttttgggactagtagtgtggaagga
atgggtacagtggaaggaccttgccagccgctgtcccgctccctgcctggtgggaagaat
ccggtgtccgtcctgatggagtacagccagcgcagcgggaaccccatcgagttcatcgtc
actgggcaggcaggcccaccacatgacccaaggttcatgtacagggtgaaggttggagag
aacttgtttacagaggcctcagctcccagcaagaaggccgcccgccagctggcagcagag
gaggccgtaaaagaattaatggctgatgggagactgcagctcaacaagcctcagttgccc
ctgggctcttccagtgacagtgatgctagtggtactgcgacgacgtgtccctctttgcca
cctctgactgcagatgagttgcgagcagcacacgaggcaggagttggagatcttattaac
cacttgaacaacaacgcagtgtcaggtcttctggaatatgctagagcgcggggctttgcc
gctgagattcgactagtgggccagtctggaccaccgcatgagcctaagttcacctaccag
gccaagctgggtggacgctggttccctccagtgtgtgcgtccaacaagaagcagggaaaa
caggaagcagcagatgcagctctacgggttctaattggagaggctgagagagcagcccgc
actggggagctcatcccagctgagcttccagtgagtggcagcactttgcatgaccagata
gcaatgttgagtcaccagcgtttcaacgccctgaccacacgtatccagcacagccttctg
ggacgcaagattctggccaccgtcgtcatgaggaggggggagggcctgggcactgttgtc
agcctgggaactggtaatcgatgtgttaaaggggaggagctaagccttaaaggggacact
gttaatgattgccacgctgaaatcatctccagaaggggatttgttcggtttctatacatt
gagctgctcaagcattatgagaacacagatgacagtatatttgaggcagtggataatgag
aaactgcaaatcaaatctgacatcacctttcacctttacatcagcacggcaccttgtggg
gacggtgctctgtttgacaagtcatgcagtgaggcaggagatgaagacgagggtcatcaa
cctctgtttgagaatgctaagcagggaaagctccgcactaaagtcgagaacggtgagggc
accatcccagtggagtcaagtgccattgtgcccacgtgggacggcatccagcacggggag
aggctgcgaaccatgagttgcagcgataagatcttgcgctggaacgtgttgggtctgcag
ggagcactgctcacccatttcctgcatccaatctacctgaagtcaatcacgctcggctac
ctgtacagccacggtcacctcactcgtgctgtttgctgtcggctggccagagacggtgaa
gcgttcacccaaagtctccctcctcccttcaagctaaatcacccagaggtcggcagggtg
agtgtgtacgactccacacggcacacaggcaagaccaaggagtcgagtgtgaactggagc
tttccagaccagcaaagcgtcgaggtgctggatggcaccaagggcaaactggatggatat
gggaacaaactctgtgtgtccagagtgtccaagtccaacctgttctgcctgttccgctct
gtgtgtgagcgtagtggccgcactgacctcctcgcactgccctgctactcccaggccaag
ttgttggccttgtccttccagctaaccaagcagcatttcttccgagctctgagcaaccac
ggctacggcgcctggatcggcaagccgctggaagagaagagctttgagtcaggggagggg
aaccggaacaatggagcaagtgtccctgtgggatacggcagcagtagaaatggagcagca
gtggagatcaagccagaggacgcatag
DBGET
integrated database retrieval system
