Cyclobacterium marinum: Cycma_5019
Help
Entry
Cycma_5019 CDS
T01592
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
cmr
Cyclobacterium marinum
Pathway
cmr01501
beta-Lactam resistance
cmr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cmr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Cycma_5019
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Cycma_5019
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cmr02000
]
Cycma_5019
01504 Antimicrobial resistance genes [BR:
cmr01504
]
Cycma_5019
Transporters [BR:
cmr02000
]
Other transporters
Pores ion channels [TC:
1
]
Cycma_5019
Antimicrobial resistance genes [BR:
cmr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Cycma_5019
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Cycma_5019
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Cycma_5019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Glyco_hydro_49
Motif
Other DBs
NCBI-ProteinID:
AEL28703
UniProt:
G0J834
LinkDB
All DBs
Position
6111764..6113179
Genome browser
AA seq
471 aa
AA seq
DB search
MKNTTSLLFCMLLLWGCKTPQATTIDENKSVPDSFNSSTDTTNSALTNWREFFPDPNLIA
LIDTALANNQELNILLQEIAVDNNEILARKGEYLPFVNIGAGAGLEKDGEYTRHGAVDES
LNIREGQAIPEPLPDFMVGAIASWELDFWKKLRNGKKAAVARYLSSVEGRNFMVTNLIAE
ISNAYYELMALDNQLEIIQKNIAIQRNALRIIEQQKQAAQETQLAVNRFAAQLLNTENLQ
YDIKQKIVETENWLNFLVGRFPQPIVRSSSEFNDITINDVQSGIPSQLLTNRPDIKQAEL
ALEAAKLDVSIARANFYPSFSIEAGVGFGSFNPKYLLNPQSILYNLGGDLMAPLVNRNAI
KATYNSANARQLQAVYNYEQTILQAYIEVANQLSQIVNSSASYTTKAKEVDLLNQSITIS
NSLFRSARADYMEVLLTQREALESRMELIEIKLSQMNAKVNVYKALGGGWN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatacgacaagcctgttgttttgcatgctccttttatgggggtgtaagacacca
caggccaccacgatagatgaaaataagtcggttccggatagtttcaattcttcaacagac
acaacaaatagtgccttaaccaattggagagaattctttcctgacccgaacttaattgct
ttgatagatactgccttggccaataatcaggagttgaacattctattgcaggaaatagca
gtagataacaatgagattttggctcgaaaaggtgaatacttaccctttgtaaacattggt
gcaggtgcgggacttgaaaaggacggtgaatatacccgtcatggagctgtggatgaaagc
ctaaatattagggaaggtcaggccatccctgaaccattgcctgattttatggtgggggct
attgcttcttgggaattggatttttggaagaaacttcgcaatggtaaaaaggcggcagta
gcccggtatttatctagtgttgagggtaggaattttatggtcaccaatttaattgctgaa
atttctaatgcatattatgaattaatggctttagataatcagctggaaataatccagaaa
aatatcgccattcaacgaaatgcacttcgaatcattgaacaacagaaacaggctgctcag
gaaacacagcttgccgtcaatagatttgctgcccaattgctcaatacagaaaacctgcaa
tacgatatcaaacagaagattgttgaaactgaaaattggttgaattttctggtgggtcgc
tttccgcaaccgatcgtcagaagttcatcagaattcaatgacattactataaacgatgtt
caatcaggaataccttctcagttattgaccaatagaccggatataaaacaagcggaattg
gctttagaggcagccaaattggatgtaagtatcgctagggctaatttctatccatcattc
agcattgaagcaggtgttggtttcgggtcatttaaccccaaatatctcctcaatccacag
tccatcctgtacaatcttggtggggatcttatggctcccttggtcaatagaaatgccata
aaggcaacttataacagtgccaatgctaggcagttacaagctgtttataactatgaacaa
accatattacaagcctatatagaagtagccaatcagctttcgcagatagtaaattctagt
gccagttatacaaccaaagccaaggaggttgatttacttaatcaatcaatcaccatttct
aatagcttgttccgctctgcgagagcagattatatggaggtattgcttacccaaagggag
gccttggaatccagaatggaacttattgaaataaaactaagccagatgaatgccaaagta
aatgtttacaaagcattaggaggtggctggaattaa
DBGET
integrated database retrieval system
