Cryptococcus neoformans var. grubii H99: CNAG_02059
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Entry
CNAG_02059 CDS
T08175
Name
(RefSeq) CCR4-NOT complex subunit CAF16
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CNAG_02059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_02059
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
CNAG_02059
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
RsgA_GTPase
Arf
nSTAND3
PduV-EutP
AAA_28
NACHT
CLP1_P
AAA_23
MMR_HSR1
ORC-CDC6-like
AAA
SRP54
Motif
Other DBs
NCBI-GeneID:
23885717
NCBI-ProteinID:
XP_012049912
UniProt:
J9VVL9
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Position
6:complement(1310361..1311950)
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AA seq
278 aa
AA seq
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MPAANQLAIDCQSLTYSWKEGDDPVLENVNLELRKGDRCLLLGANGAGKSTLLRILAGKR
LTKTRTCRILGQDVFMNPPGGVVYLGTEWSSNPVVRSDIVVSHFLDSVGGYRHKERRDRL
LRILDVDLDWHMHQISDGERRRVQLCMGLMGEWDVLLLDEVTVDLDVLVRADLIDFLISE
SEIRGATIVYATHIFDGLKKFPTKICHIQLGSTPRGLIAWPLADKGLQEETLFELALEWL
REDRDLRRQKEKEKGRARGPKMDTRDAKTFFEKYDYSH
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagcgaatcaattggccatcgactgtcagagtctcacctattcatggaaagaa
ggcgacgatccagtcctcgaaaatgtgaatctcgagcttcgaaagggggatagatgtctg
ttattgggtgctaacggagcgggaaaatcgacacttttaagaattttagcaggcaagagg
ttgaccaagacgaggacttgtcgaatcttggggcaggacgttttcatgaaccctccaggc
ggtgtcgtctatctcggaacagaatggtcctctaaccccgttgttcgttcggacattgtt
gtttctcatttcttagactctgtgggtggttacagacacaaggaaaggagagataggctt
ttgaggattctcgatgtcgatcttgactggcatatgcaccaaatctctgatggagagcgt
cgtcgggtccagctttgtatgggacttatgggagaatgggatgtcttgcttttggacgaa
gtcactgttgatctggacgtgctcgttcgtgcagacttgattgactttttgatctctgaa
tccgagataaggggagctactattgtttatgccacacacatctttgacggccttaaaaaa
ttccctacaaaaatttgtcacatccagctcggctcaactcctcgtggccttatcgcttgg
ccccttgccgacaaagggttgcaagaggaaacacttttcgagttggcgttagagtggttg
agggaagatagagatttgagaaggcagaaggaaaaggagaaaggaagggcgagagggccc
aagatggatacgagagatgcgaagaccttcttcgagaagtatgattactcccattag
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