Cedecea neteri SSMD04: JT31_00890
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Entry
JT31_00890 CDS
T03298
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
cnt
Cedecea neteri SSMD04
Pathway
cnt01501
beta-Lactam resistance
cnt02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cnt00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JT31_00890
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JT31_00890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cnt02000
]
JT31_00890
01504 Antimicrobial resistance genes [BR:
cnt01504
]
JT31_00890
Transporters [BR:
cnt02000
]
Other transporters
Pores ion channels [TC:
1
]
JT31_00890
Antimicrobial resistance genes [BR:
cnt01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JT31_00890
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
JT31_00890
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
JT31_00890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AIR03232
UniProt:
A0A089PSB4
LinkDB
All DBs
Position
200879..202249
Genome browser
AA seq
456 aa
AA seq
DB search
MKILSPLAICLAAAFSAGCANTLKSDYHAPEVSYPASWNKSEPVGNIAPFDWKAFNDPQL
DSWLRQVMASNNDVAIAVLRVYRARLDAERVGIANDPGLKASLGVDGKTPLNNSSGWTKG
SSASLSTSYELDLWGKIARQRDAAEWASHASEEDLRAARLTLLSETSNNYWRIGFVNQQI
DVLQQSIGYAKETLRLAEARYRAGGASALDVVDAQQSLLAQENRLTGLQRERLLGLNQQA
VLLGTAPGSAVVEPTKLPKGTLPQVNANIPASVLMHRPDISAQEWRVREALANVDIRRTE
YYPAFSLTGSLGTGSSSLLKVLHNPIGSVGASLTLPFLEWRQRGVEVKIARNDYEQRVLA
FKQSLYKAMSSIEDELSLRNQLLAQELRLREGLALARKSERLNEVRYRQGAARISFWLDA
QEKRRQAELLLDENRFNQLQNLAKIYLEFGGSSKFP
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttatcacctttggctatatgccttgccgccgcgttcagcgcaggctgcgca
aatacgcttaaaagcgattatcacgcgcccgaagtgagctatcccgccagctggaacaag
agcgagccggtcggaaacattgccccgtttgactggaaagcgtttaacgatccccagctc
gatagctggctgcgccaggtcatggcaagcaataacgacgtggctatcgccgtgctgcgg
gtgtaccgggcgcgactggacgcggaaagagtcggtatcgccaacgatcctgggctaaaa
gcttcgctgggcgtagacggaaaaaccccgctgaataactcgtccggctggacaaaaggc
agctctgccagcctcagcaccagctatgagctggatctctgggggaaaatagcccgccag
cgcgatgcggcggagtgggcaagtcatgccagcgaagaagatttacgcgccgcacgcctg
acgctgctttcagagaccagcaataattactggcgcatcggctttgtgaaccaacaaatc
gacgtgctccagcagagcatcggctatgcaaaagagacgctgcgtctggcggaggctcgc
tatcgtgcaggtggagcttcagccctggatgtcgttgacgctcaacaaagcctgctggcg
caggaaaatcgactcaccgggctgcagagggaacgcctgctggggcttaaccaacaggca
gtattgctcggtaccgcgccgggcagcgctgttgtggagccaacaaaactgccaaaagga
accctgccgcaggttaacgcgaacattcctgccagcgtgctgatgcatcggcctgatatc
agcgcgcaagagtggcgggtgcgtgaagcgctggccaatgttgatatccggcgtaccgaa
tactatcccgcgttcagcctgacgggatctcttggcaccggcagcagctcgctgctgaaa
gtgctgcataacccaatcggttccgttggcgcgagcctgacgctaccgttcctcgagtgg
cggcagcggggcgtggaggtgaaaatcgcccgtaacgattacgagcagcgagtgctggcg
tttaaacagtcgctttataaagcaatgagcagcattgaagacgaactctccctgcgcaat
cagctgttggcgcaggaattaaggctccgggaggggctggcgcttgcgcgtaagtcagag
cggctgaatgaagtgcgctaccgtcagggggcagcgcgtatttcattctggctcgatgcc
caggaaaaacgtcgccaggcggaactgttgctggatgaaaatcgctttaatcagctgcaa
aatctggcaaaaatttatctcgagtttggcgggtcgtctaaattcccctaa
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