Comamonas odontotermitis: LAD35_14470
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Entry
LAD35_14470 CDS
T07833
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
codo
Comamonas odontotermitis
Pathway
codo01501
beta-Lactam resistance
codo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LAD35_14470
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LAD35_14470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
codo02000
]
LAD35_14470
01504 Antimicrobial resistance genes [BR:
codo01504
]
LAD35_14470
Transporters [BR:
codo02000
]
Other transporters
Pores ion channels [TC:
1
]
LAD35_14470
Antimicrobial resistance genes [BR:
codo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LAD35_14470
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LAD35_14470
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LAD35_14470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Ail_Lom
DNA_pol3_alpha
Motif
Other DBs
NCBI-ProteinID:
UBB16028
LinkDB
All DBs
Position
complement(3142205..3143710)
Genome browser
AA seq
501 aa
AA seq
DB search
MNRSFPLYARNRQLALSAIALAATTFIAGCADMGGIHTEASARSPQSLGLVVEPSAADQA
AAVAPVDAQWWTALGDSHLNQLVETALADGPSLKVAEARIRKAWAMAQVSDAADGPQVNG
QATANRNHAPANGLIPPPIAGHNYSTAEARINGSWSLDLFGKHRAALDAAVGSARAAQAD
RDAARVLLASNVVQAYVQLSRWQAQETVAERAIAQREHTLKLVRDRYSAGLDTTLEVRQS
ESGVPEARVQLEQVREQKHLAQNALAALVGQPGNGQNLQAAPIASLKLPQFPQQLSASLL
GRRADVVAARWRVEAADRSIAEAKAEFYPDINLTAFIGLSSIGFNNFAKTNAREWGVGPA
LSLPIFDSGLLRANLRGKSADYDVAVEGYNQAVINAVHDVADQIASAKSAYAQLPEQRKA
ADAAQSALDIANQRYAAGLGTYLNVLSAETNVLAQRRQSVDIEARILQTNAALAQALGGG
YSDPEPSAAAIDTAASQKKAS
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgcagttttcctctttatgcacgaaatcgccaactagcgctttctgccattgcg
cttgcagctactactttcatagctggatgcgccgatatgggtggcatccacaccgaagcc
tccgcgcgctctccgcagtcgctgggcttggtggtggagccgtctgctgccgaccaggcc
gcagccgtggcgccggtcgatgcacagtggtggacggccttgggcgattcgcacctgaac
cagttggtggagacggcgctggcagacgggccgagcctcaaggttgccgaggcccgcatt
cgcaaggcctgggccatggcccaggtgagcgacgcagccgacggcccgcaggtgaacggc
caggccacggccaaccgcaaccatgcaccggccaacggcctgattccgccgccaattgcc
ggccacaactacagcactgcagaggcgcggatcaacggaagctggtcgctcgacctgttt
ggcaagcaccgcgcggcgctggacgctgcggtgggctctgcccgcgcagcgcaggccgat
cgggatgccgcccgcgtgcttctggccagcaacgtggtgcaggcctatgtgcaactgtcg
cgctggcaggcgcaggaaacggtggccgaacgggccattgcccagcgtgaacataccctc
aagctggtacgcgaccgctacagcgcaggcctcgataccaccctggaagtgcgccagagt
gaaagcggcgtgcccgaggcgcgcgtgcagctggaacaggtgcgcgagcaaaagcacctg
gcgcagaacgcactggcggcgctggtgggccagcccggaaacggacagaacctgcaggcg
gccccgattgccagcctgaaactgccgcagtttccgcagcagctgtctgccagcctgctg
ggccgccgcgccgacgttgtggctgcgcgctggcgcgtggaagccgcagacaggagcatt
gccgaggccaaggcggagttctatccggacatcaacctgacggccttcatcggcctgtcg
agcatcggcttcaacaattttgccaagaccaatgcacgtgaatggggcgtgggcccggcg
ctgagcctgccgatctttgactcaggcctgctgcgtgccaacctgcgcggcaagtcggcc
gattacgacgtggcggtggagggctataaccaggccgtcatcaatgccgtgcacgatgtg
gccgaccagattgcctccgcgaagtcggcctatgcccagttgcccgagcagcgcaaggca
gccgacgcggcgcaaagcgcgctcgacatcgccaaccagcgctacgccgcagggctgggt
acctatctgaacgtgctgtcggccgaaacgaatgtgctggcccagcgccgccagtcggtc
gatatcgaggcacgcatcctgcagaccaacgctgcgctggcccaggcgctgggcggtggc
tacagcgatccggagccgtcagcagccgccatcgacaccgcagccagccagaagaaagcc
agctga
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