Colwellia sp. Arc7-D: DBO93_09670
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Entry
DBO93_09670 CDS
T05422
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola01501
beta-Lactam resistance
cola02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DBO93_09670
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DBO93_09670
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cola02000
]
DBO93_09670
01504 Antimicrobial resistance genes [BR:
cola01504
]
DBO93_09670
Transporters [BR:
cola02000
]
Other transporters
Pores ion channels [TC:
1
]
DBO93_09670
Antimicrobial resistance genes [BR:
cola01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DBO93_09670
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
DBO93_09670
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
DBO93_09670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
tPilZ
DUF6740
DUF508
Motif
Other DBs
NCBI-ProteinID:
AWB57810
LinkDB
All DBs
Position
complement(2195351..2196895)
Genome browser
AA seq
514 aa
AA seq
DB search
MSERDNKHKSSLLFWKISKLTTRLKASNILVVSIALLVGACSTPTGMSFQKPSRLTEHNV
PNKWQENIASIENDTIATDWIKSFKDNTLDDLIGYALQNNYALDADKIGVALAKERLNIS
AATDFPELSLSLANSRNKQVSNSVTTYQNSADLSLDLSYEIDLWGKLSDQQNQDRLSYAA
AQASYQHSKLTLVADISKAWFNLTQAQQLLTLYQERAENLQRNLLMIQSSYQLGLNDALD
VYLTKNTVNQELARVAQQQQALKVSSRALELLVGDYPLAKKVSEQNLPFIADEIKLGLPA
QLLTRRADIQASWLSLLALDAGLAIAHKQRFPSFNLNASVGDNASELTNLLNGGALAWSL
MGSITSPLFNAGRLESLETQAKLTVVQNEKLYLQQVYQAFADVENSVSERESLNQQYNFY
LKAQENALAAEKLSFDQYLRGLVTYTTVLEAQRRSFDAQTTVIQLTNELLQNRIEIYLAL
GGDYLDGTTQTQQINSTKGNSLPASLTNRISMEK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcgagataataagcataaatctagtttgcttttttggaaaatatccaagtta
actacaaggttaaaggcaagtaatatactggtagtgagtatagctttgcttgtgggggct
tgtagtactcctacagggatgtcttttcaaaaacctagtcgtttaacagagcataatgtc
ccaaataagtggcaagaaaatattgcatcaattgaaaatgacacaatagcgactgattgg
attaaaagctttaaagacaataccttagatgatctaattggttacgcgttacaaaataat
tatgcacttgatgccgataaaataggtgttgcgcttgcaaaagaacgtttaaatataagt
gcagctacagactttccagagctatctttatctctggctaattcaagaaataaacaggtt
tcaaacagtgtcactacgtatcaaaatagcgctgaccttagtctcgatttaagttatgaa
attgacctgtggggaaaactgtcagaccaacaaaatcaagacagattaagttatgcagca
gcgcaagcaagttaccagcatagtaaactaacgttagtcgctgatatcagtaaagcttgg
tttaatttaacccaagcacaacagttgctaactttatatcaagaacgtgctgaaaacctt
caacgtaacttattaatgattcaatcttcatatcaattgggtttgaatgatgcattagat
gtttatctcaccaaaaatacagttaaccaagaattggctcgtgtagctcaacagcagcaa
gcattgaaggttagcagtagagcacttgagctgctggtaggagattatccgctagctaaa
aaagtaagtgagcagaacttaccgtttattgctgatgaaattaagctaggtttacctgca
caattactcacccgaagagccgatattcaagcaagttggttatcgctattagcgttagat
gctggcttagcgatagcacataagcaacgtttcccaagttttaatttaaatgccagtgtt
ggagataatgccagtgaattaactaatttgctcaatggtggagcattagcttggtcttta
atgggcagtataaccagcccgttatttaatgctggccgactcgagtcactggaaacccaa
gcgaaattaaccgtagttcaaaacgaaaagctatatttacaacaagtttatcaagccttt
gctgacgtggaaaatagcgtaagcgagcgagagtcgcttaatcagcaatataatttttat
cttaaagcacaagaaaacgctttagcggctgaaaaactttcatttgatcaatacttacgt
ggcttagtcacctataccacggtattagaagcacaaaggcgctcatttgatgctcaaact
accgttattcaactaaccaatgaactattacaaaatagaatcgaaatttaccttgcttta
ggtggtgactatcttgatggcacaacccaaacgcagcaaataaacagtactaaaggtaac
tcattaccagcatcgttaactaaccgtataagcatggaaaagtaa
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