Cellulophaga omnivescoria: PBN93_07940
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Entry
PBN93_07940 CDS
T08738
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
comn
Cellulophaga omnivescoria
Pathway
comn01501
beta-Lactam resistance
comn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
comn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PBN93_07940
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PBN93_07940
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
comn02000
]
PBN93_07940
01504 Antimicrobial resistance genes [BR:
comn01504
]
PBN93_07940
Transporters [BR:
comn02000
]
Other transporters
Pores ion channels [TC:
1
]
PBN93_07940
Antimicrobial resistance genes [BR:
comn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PBN93_07940
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PBN93_07940
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PBN93_07940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF6847
Motif
Other DBs
NCBI-ProteinID:
WBU90941
LinkDB
All DBs
Position
1772926..1774383
Genome browser
AA seq
485 aa
AA seq
DB search
MKIINKYKTVLRLKKAYLVCVICVFAFYSCVPVREIKNENTTVPTVYNNTTTDTVNSAVM
KWDQYFSDPNLKAIIDTALVNNQELNIMLQEVQVAKNEILVRKGEYLPFVNIQAGAEVEK
VGRYTSQGANDANTDIKDGKEFPEPLPNYQVAAVASWELDVWKKLRNSKKAAVLEYLASE
EGKNFMITNLVSEIASSYYELLALDNQLKIIDQNIAIQKNVLEIVKLQKQAARATELGVK
RFEAEVLKNQSSRYQIQQQITEAENKICFLMGSYPKHITRTTTDFVEITTTPVYAGVPSQ
LLQNRPDIKRAEYELAAHKLNIKVAKANFYPSIGIKAGVGLEAFKPKFLTKTPESVLYNI
VGDVVAPLINRNAIKAAYKNANKRQIKAVYEYEKAILNGYIETTNQLSNIKNLKKSFEAK
QQEVNALTESIEISNKLFKSARADYMEVLLTQRDALEAKIELVETKKAQMLAHVNIYHAL
GGGWN
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaagataattaataaatataaaactgtacttaggcttaaaaaagcttatctagtttgt
gttatttgtgtgtttgctttttattcttgtgtaccagtaagagaaataaaaaatgaaaac
acaactgtgccaactgtatacaataatacaactacagacactgtaaattctgctgttatg
aaatgggatcagtatttttctgatcccaatttaaaagcaattatagatactgccttagtt
aataaccaagagctaaatattatgctacaagaagtacaggtggctaaaaatgaaattttg
gttagaaaaggtgagtatttaccatttgtaaacatacaagcaggtgcagaggtagaaaaa
gtaggtcgttatacaagtcaaggcgccaacgatgctaacacagatattaaagacggaaaa
gaatttccagaaccattacctaattatcaagtagctgcagttgcgtcatgggagttagat
gtttggaaaaaactaaggaattctaaaaaagctgctgttttagagtatttggcaagtgaa
gaaggcaaaaactttatgattaccaatttggtttcagaaattgcttcttcatactatgag
cttttagctctagacaatcagcttaaaataatagaccagaatatagctattcaaaaaaac
gtgctagaaatagtcaagctgcaaaaacaagcagcaagagcaacagaattaggtgttaaa
cgttttgaagcagaggttttaaaaaaccaaagttctagataccaaatacagcaacagatt
acagaggcagaaaataaaatttgttttctaatgggatcttatcctaagcatattacaaga
accacaacagattttgtagaaattactactactccagtgtatgcaggtgtaccaagtcag
ttactacaaaacagaccagatattaagcgtgcggagtatgagttagcggcccataaatta
aatattaaagtagccaaagccaatttttatccatcaataggtattaaagcaggtgtgggg
ttagaggcttttaagcctaagtttttaacaaaaacgccagagtctgtgctttataatatt
gttggtgatgttgttgcaccactaataaaccgtaatgctattaaggcagcatataaaaat
gcaaataaaagacaaataaaagcggtatacgagtatgagaaggctattttaaacggttac
atagaaaccacaaaccaattgtctaacataaaaaatctaaaaaaaagttttgaggcaaaa
cagcaagaagtaaatgcgttaacagagtctatagaaatttctaataagttatttaaatct
gcaagagcagattatatggaggtattactaacacagcgtgatgctttagaggcaaaaata
gaactagtagaaaccaaaaaagcacaaatgctagcgcacgtaaatatataccacgcttta
ggtggcggatggaattag
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