Chitinophaga oryzae: HF329_02350
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Entry
HF329_02350 CDS
T07451
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
coy
Chitinophaga oryzae
Pathway
coy01501
beta-Lactam resistance
coy01503
Cationic antimicrobial peptide (CAMP) resistance
coy02020
Two-component system
coy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HF329_02350
09132 Signal transduction
02020 Two-component system
HF329_02350
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HF329_02350
01503 Cationic antimicrobial peptide (CAMP) resistance
HF329_02350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coy02000
]
HF329_02350
02044 Secretion system [BR:
coy02044
]
HF329_02350
01504 Antimicrobial resistance genes [BR:
coy01504
]
HF329_02350
Transporters [BR:
coy02000
]
Other transporters
Pores ion channels [TC:
1
]
HF329_02350
Secretion system [BR:
coy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HF329_02350
RTX toxin transporter
HF329_02350
Multiple protein transporter
HF329_02350
RaxAB-RaxC type I secretion system protein
HF329_02350
Antimicrobial resistance genes [BR:
coy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HF329_02350
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HF329_02350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
CaM_bind
Motif
Other DBs
NCBI-ProteinID:
QJB30207
UniProt:
A0AAE7D614
LinkDB
All DBs
Position
complement(534408..535919)
Genome browser
AA seq
503 aa
AA seq
DB search
MSTIITKGAMLIPLLAAGFSVMAQYTAKGTPPENALMAASGILRQTPSGTVMARYDGAAA
APSPAVRNDQGVNLLDSYIQQAFTNNKGLKDQRFQLDKSLAALQEARSLFGPNVTFLGSY
TKAGGGRTIDMPIGDLLNPVYSSLNQLTNSHQFPQVDNVSVLLNPDNFFDAKFRTSLPLI
NAEIYYNQKIKKEHLTRQQAALNVYKRQLVQDIKTAYFQYYQASQAVAIYRNALSLIQES
IRINESMVRNGVRNNTALYRSQTEKEKTDASISKALNEQQNARAYFNFLLNRDLQTDIAL
DSNLLAHLPPALTADGSISGREELQQYKSAATAYRLNEKLEKAYLIPRLSTFLDLGNQSM
GLHFDDKSRYYLFGVNLEWTLFGAHKYKHRIRQATLDVQAIENATAQTTDALQLQLYQAG
NNYRTALRNLVTAESQLSFAQRYYRDQLKVYKEGQLLYIELVDAQNQLTQAQLQMAVSQA
AVQTAYAGVERAQASYNIESVQP
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaatcatcacaaaaggagcaatgttaatcccattgctggcagcgggattcagc
gtgatggcccaatatacggctaagggtactccgcctgaaaatgcgctgatggctgcatcc
ggcatactgcgtcagacgccgtccggaaccgtgatggcccggtatgacggcgccgcagcc
gcaccctctcccgctgtccggaatgaccagggcgtcaacctgctcgatagctatatccaa
caggcattcaccaacaataaaggcctgaaggaccagcgctttcagctggacaaatccctt
gcagcgctgcaggaagcccgaagcctttttgggccgaatgtcaccttccttggcagttat
accaaagccggcggcggccgcaccatcgatatgcccattggcgacctgctgaatcctgta
tattccagcctcaaccaactgaccaacagccaccagtttccgcaggtagacaacgtgtct
gtgctgctgaacccggacaactttttcgatgctaagttcagaaccagtctccctttgatc
aacgcggaaatctactacaaccagaagatcaaaaaggagcacctgacacggcagcaggca
gcgctgaacgtatacaagcgccaactggtgcaggatatcaaaaccgcctacttccagtat
taccaggcgtcgcaggctgtggctatttaccgcaacgcgctgtcactcatacaggagagt
atccggatcaacgagagcatggtgcgcaacggcgtccgcaacaataccgccctgtaccgc
tcgcagacggagaaagagaagacggatgcctccatcagcaaggcattgaacgaacaacag
aatgcccgggcatatttcaacttcctgcttaaccgtgatttacaaacagacatcgcgctg
gacagtaatctgctggctcatctgcccccggcccttaccgctgatggcagcatcagcggc
cgcgaggagctgcagcaatacaaaagtgcggctaccgcataccggttgaacgaaaaactg
gaaaaagcctatctcattccccgcctcagtactttcctcgatctcggcaaccagtccatg
ggcctgcatttcgatgataaatcccgctactacctttttggtgtcaatctcgaatggacg
ttgtttggcgcgcataaatacaaacaccgtatccggcaggccacgctggacgtgcaggcc
atcgaaaacgccaccgcgcaaacgacggacgcgctgcagctgcaactataccaggcagga
aataactatcgcaccgcgctgcgcaacctggtcaccgcggaaagccagttgtcttttgcg
caacgttactaccgcgatcagctgaaagtatacaaggaggggcagctgctatacatcgaa
ctggtagatgcacagaaccagcttacgcaggcacagctgcaaatggccgtatcacaggca
gccgtgcaaaccgcctatgccggtgtggaacgtgcccaggcctcttacaatattgaatcc
gtacaaccataa
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