Chitinophaga oryzae: HF329_24175
Help
Entry
HF329_24175 CDS
T07451
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
coy
Chitinophaga oryzae
Pathway
coy01501
beta-Lactam resistance
coy01503
Cationic antimicrobial peptide (CAMP) resistance
coy02020
Two-component system
coy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HF329_24175
09132 Signal transduction
02020 Two-component system
HF329_24175
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HF329_24175
01503 Cationic antimicrobial peptide (CAMP) resistance
HF329_24175
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coy02000
]
HF329_24175
02044 Secretion system [BR:
coy02044
]
HF329_24175
01504 Antimicrobial resistance genes [BR:
coy01504
]
HF329_24175
Transporters [BR:
coy02000
]
Other transporters
Pores ion channels [TC:
1
]
HF329_24175
Secretion system [BR:
coy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HF329_24175
RTX toxin transporter
HF329_24175
Multiple protein transporter
HF329_24175
RaxAB-RaxC type I secretion system protein
HF329_24175
Antimicrobial resistance genes [BR:
coy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HF329_24175
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HF329_24175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QJB34218
UniProt:
A0AAE7D9A5
LinkDB
All DBs
Position
complement(6254724..6256076)
Genome browser
AA seq
450 aa
AA seq
DB search
MRISQIAGFFLFFCFFANITPAVAQDTWSLKRCVDYAMEHSITVKQQEVQKRLAELTLQQ
SRLSMIPGFSGNVSAGYSDGRIASIQDNAYINQSVFNASGSLNMRGDLFNWFSKQNQIAA
NRLDAESNSFLLQKARNDLAFNVATAFLQILLKEEQVKVNEVQVKQTLSNLDNTKKLVIA
GSVPESNQADLEAQLAQDSTNLVTARNDVILAILQMKAYLNLGFEIPFVPEIPENIATLP
MTPLGEMDPEMVYSAALTTYPLVKSDELRIKSADRAYRSAKGQLYPTLSLVGGLSTSYAN
NFYDRDGKLIPFNKQLDNTFGKNIGLSLGIPLFSGWQQRTAVAKAKVNVHSMELSRDLDN
QKLRQDIYTAHANAVAALQKFNASTTGVMAAQKAYDFATKRFNLGLMNTIDYITTQTRLF
KAQIDKVSAQYDYIFKMKLLEFYRDQRISL
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagaatatcccaaatcgcaggatttttcctgttcttctgcttctttgctaacataacc
ccggctgtagcgcaggatacgtggagtttgaaacgctgtgtggactatgctatggaacac
agcatcactgtaaaacaacaggaggtgcaaaaacggcttgcagaacttacgctgcaacaa
agccgcctcagtatgatacccggcttctccggcaacgtcagtgcagggtattccgatggt
cgtatcgccagcattcaggataacgcctatatcaaccagtctgtcttcaacgccagtggt
tcacttaatatgagaggcgatttgttcaactggttttcaaaacagaaccagatagcagcc
aacaggctggatgcagaatccaatagtttcctgctgcaaaaagcccggaatgacctcgct
ttcaatgttgcaacagcatttctgcagatcctgctgaaggaagaacaggtaaaagtaaac
gaggtacaggtaaaacaaaccttgtcaaacctcgacaataccaaaaagctggtaatcgcc
ggttctgttccggaaagcaaccaggccgacctggaagcgcaactggcgcaggacagcacc
aacctggtgaccgccaggaatgatgtaattttggctatcttgcagatgaaggcttatctg
aacctcggatttgagattcctttcgtaccggaaatcccggagaacatcgccacactgccg
atgacacctctcggggaaatggacccggaaatggtgtatagcgccgcgctgaccacctat
ccgctggtaaaatccgatgagctcaggatcaaaagtgcagacagggcctaccgttcagcg
aaaggacagctatacccgaccttgtccctggtgggtgggctttctaccagctatgccaac
aacttctatgaccgtgacggaaagctgatccctttcaacaaacagctggataataccttc
ggtaaaaatatcgggctgagtctgggaattccgctgttcagcggctggcaacaaaggacc
gctgtagcaaaggcaaaagtgaatgtacatagcatggaactgagccgcgaccttgacaac
cagaaactacggcaggacatctataccgcccatgccaacgcggtggccgcccttcagaaa
ttcaacgcttccactaccggcgtaatggccgcccagaaagcgtatgacttcgccaccaaa
cgttttaaccttggattaatgaacaccattgattatatcacaacgcaaaccagattgttc
aaagcccagattgataaagtctcggcgcaatacgattacatttttaaaatgaaattgctg
gagttctaccgggaccaaagaatatccctgtag
DBGET
integrated database retrieval system
