Chitinophaga oryzae: HF329_26020
Help
Entry
HF329_26020 CDS
T07451
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
coy
Chitinophaga oryzae
Pathway
coy01501
beta-Lactam resistance
coy01503
Cationic antimicrobial peptide (CAMP) resistance
coy02020
Two-component system
coy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HF329_26020
09132 Signal transduction
02020 Two-component system
HF329_26020
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HF329_26020
01503 Cationic antimicrobial peptide (CAMP) resistance
HF329_26020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coy02000
]
HF329_26020
02044 Secretion system [BR:
coy02044
]
HF329_26020
01504 Antimicrobial resistance genes [BR:
coy01504
]
HF329_26020
Transporters [BR:
coy02000
]
Other transporters
Pores ion channels [TC:
1
]
HF329_26020
Secretion system [BR:
coy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HF329_26020
RTX toxin transporter
HF329_26020
Multiple protein transporter
HF329_26020
RaxAB-RaxC type I secretion system protein
HF329_26020
Antimicrobial resistance genes [BR:
coy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HF329_26020
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HF329_26020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF5858
Motif
Other DBs
NCBI-ProteinID:
QJB34569
UniProt:
A0AAE6ZJW6
LinkDB
All DBs
Position
6684541..6685899
Genome browser
AA seq
452 aa
AA seq
DB search
MKRLKLTLILLMGIGGLHAYAQAPLTLQEALKFALNNNQQLSRTKMEEEMGKFKTQEVRS
QALPQINGNANYTDNLKLAQSLLPGTVIGKPDSSVTITFGTQYTATVGAELNQQIFNQAV
FTGLKAAKAGEEYYTLQTQKSTEDVIYNVSGLYYQLLVLQEKIVTVNSNIEKLTQLVNAT
QSQYENGLAKKIDLDRIKVNLTNYKTQRTQLLNNAATQANNLKRQLGMPLQSSFTIPRAS
LKEIETKAAGVLQYDDMNLEERTEFKLIKKQEQLQEFQKKAYLAEYYPTLSLFGRYSYNG
MSQQWLFSKNDPANSTFWYGAAAVGLSVHIPIFDGFGRRSKVSQANVTLRQLAKQKEEIA
LNLNADYENAKLQVRTNLSTIHTQKENVDLANEVYYSTQNNYKLGLASLTDLLNAETSLA
DAQNSYNEALLQYKMAELDIIKSKGSLRELLN
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgattaaagttaacgcttatcctcttaatggggatagggggattgcatgcctac
gctcaggcgccactgacacttcaggaagcgctgaagtttgcactgaataacaaccagcaa
ctctccagaacaaaaatggaagaggaaatgggtaagttcaaaacacaggaagtgcgctca
caggcccttccccaaatcaatggtaacgctaactatacagacaacctgaaactggcacag
tccctcctcccgggaacagtgatcggtaagccggacagctctgtgaccatcaccttcggt
actcagtataccgccactgtaggcgcggaactgaatcagcagatctttaaccaggcggta
ttcaccggcctgaaagctgccaaagccggagaagaatattataccctgcaaacgcagaaa
tccacggaagacgtgatctacaacgtttccggcctctattaccagttgctggtattacag
gaaaaaatcgtaacggtgaacagcaacatcgaaaagctgacgcagctggtaaacgccacc
cagtcacaatatgagaacggcctcgccaaaaaaattgacctggaccgtatcaaggtaaac
ctgaccaattacaaaacccagcgcacccagttgctcaacaacgccgctacccaggccaac
aacctgaaacgccagttgggtatgccgctgcagtccagctttaccatcccgcgcgcttcg
cttaaagagatcgaaaccaaagccgccggcgtattacaatacgacgatatgaatttggaa
gagagaacagaattcaaactcatcaaaaaacaggaacaactgcaggagttccagaagaaa
gcctatctcgcagagtactaccctaccctgtcgctctttggccgctattcctacaacggt
atgagccagcagtggcttttctccaaaaatgatcctgccaactccaccttctggtatggc
gccgccgccgtaggcctgtctgtgcatatccccatcttcgatggtttcggccgccgctcc
aaagtaagccaggcaaacgtaaccctgcgccagctggccaaacagaaagaggagatagcg
ctcaacctgaacgcagactacgaaaacgccaaactgcaggtgcgcaccaacttgtctacc
attcacacccagaaggagaacgtagacctggccaatgaagtgtattattctacccagaat
aactacaaacttggcctcgccagcctgacagacctgctcaacgcagaaacatcgctcgcc
gatgcgcagaacagctacaacgaagcactgcttcaatataaaatggccgaactggacatt
atcaaaagcaaaggcagcctgagagaactgctgaactaa
DBGET
integrated database retrieval system
