Chitinophaga oryzae: HF329_27445
Help
Entry
HF329_27445 CDS
T07451
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
coy
Chitinophaga oryzae
Pathway
coy01501
beta-Lactam resistance
coy01503
Cationic antimicrobial peptide (CAMP) resistance
coy02020
Two-component system
coy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HF329_27445
09132 Signal transduction
02020 Two-component system
HF329_27445
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HF329_27445
01503 Cationic antimicrobial peptide (CAMP) resistance
HF329_27445
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coy02000
]
HF329_27445
02044 Secretion system [BR:
coy02044
]
HF329_27445
01504 Antimicrobial resistance genes [BR:
coy01504
]
HF329_27445
Transporters [BR:
coy02000
]
Other transporters
Pores ion channels [TC:
1
]
HF329_27445
Secretion system [BR:
coy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HF329_27445
RTX toxin transporter
HF329_27445
Multiple protein transporter
HF329_27445
RaxAB-RaxC type I secretion system protein
HF329_27445
Antimicrobial resistance genes [BR:
coy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HF329_27445
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HF329_27445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QJB34835
UniProt:
A0AAE6ZNV5
LinkDB
All DBs
Position
complement(7047990..7049324)
Genome browser
AA seq
444 aa
AA seq
DB search
MKKYITSIGLLFILIAGSTPAASAQQQILTLEQAIDLALKNNFSIRLARNTAELSANDYA
YANFAFVPRLNATAGTTWNNTATKQEFANGTKRDTSGIKGNNISANATLSWTLFDGLKMF
ATREKLEAIKGLGELAIKDQIQNSIATVINGYYNIVQQKQQLIAVREQLSISEERVKLSD
AKFTTGLGPKTDLLQSKVDYNAQKALMLRQLTLIEQSKALLNQLMAVPAGATGYDVPDSI
PINTGLSFVALQQNVANNNTAIKVQQQNINISALTIKERRADYFPVVTFNSGYNYSRNTS
NAASNNFSPRFNRNGVFNYGLTAAIPIFNGFNVKRQIKNARIDFDFQNITLDNLKSQVDL
SLNNAFKDYEYYKKALELEEENNQLAEENMMVALERFKQGVSTTIEVKQAQQSLEDSNYR
LIQARYNTKLAETELQRLNGSLLQ
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaatatatcaccagcatcggcctcctctttatcctcatagcgggaagtacgccc
gctgcctccgcgcagcagcagatacttacgctggagcaggccatagacctggcgcttaaa
aacaatttctctatccggctggccagaaataccgcggaactgtcggctaacgattacgcc
tatgcgaatttcgccttcgtgccccgactcaatgccacggcgggcaccacgtggaataac
accgccaccaaacaggaattcgccaacggcaccaaaagagataccagcggcatcaaaggc
aataacatcagcgccaacgccaccctcagctggacgctcttcgacggcctgaaaatgttt
gctacccgcgaaaaactggaagccatcaaaggcctcggcgaactggccatcaaagaccag
atacagaactccatcgctacggtgatcaacggctattataacatcgtacaacagaaacaa
caactgatcgccgtccgcgaacaactgtctatctctgaagaaagggtgaaactctccgat
gccaaattcaccaccggcctcggtcctaaaacagacctgctgcagtccaaggtagactac
aacgctcagaaagcgctgatgctgcggcagctgacgcttatagaacaaagcaaggcgctg
ctgaaccagctgatggccgttccggccggcgctaccggctatgatgtgccggattccatc
cccatcaacaccggactgtcctttgtggccctgcagcagaacgtcgccaacaacaacacc
gccatcaaagtacagcaacaaaacatcaacatctctgcactgactattaaagaacgtcgt
gcagattattttccggtagttaccttcaactccggttataactacagccgcaatacttcc
aatgcagcgtccaacaacttcagcccccggtttaaccgcaacggcgtatttaactacgga
ctaacggcggccattcccatcttcaatggcttcaacgtaaaacggcagataaaaaatgcc
aggattgattttgatttccagaacattacgctagacaacctcaaatcccaggtagacctg
tcgctgaacaacgcctttaaagattatgaatattacaagaaggcgctggagctggaagaa
gaaaacaaccagctggcagaagagaatatgatggtggcgctggaacgcttcaaacaaggc
gtatctaccaccatcgaagtaaaacaggcgcaacaaagcctggaagattccaattaccgg
ctgatacaggcccgctacaataccaaactggctgagacagaactgcagcgcctgaacggc
tccctgttgcagtaa
DBGET
integrated database retrieval system
