Chitinophaga oryzae: HF329_31865
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Entry
HF329_31865 CDS
T07451
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
coy
Chitinophaga oryzae
Pathway
coy01501
beta-Lactam resistance
coy01503
Cationic antimicrobial peptide (CAMP) resistance
coy02020
Two-component system
coy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
coy00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HF329_31865
09132 Signal transduction
02020 Two-component system
HF329_31865
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HF329_31865
01503 Cationic antimicrobial peptide (CAMP) resistance
HF329_31865
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coy02000
]
HF329_31865
02044 Secretion system [BR:
coy02044
]
HF329_31865
01504 Antimicrobial resistance genes [BR:
coy01504
]
HF329_31865
Transporters [BR:
coy02000
]
Other transporters
Pores ion channels [TC:
1
]
HF329_31865
Secretion system [BR:
coy02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HF329_31865
RTX toxin transporter
HF329_31865
Multiple protein transporter
HF329_31865
RaxAB-RaxC type I secretion system protein
HF329_31865
Antimicrobial resistance genes [BR:
coy01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HF329_31865
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HF329_31865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF7168
NfeD1b_N
ComC
ATP-synt_DE
Motif
Other DBs
NCBI-ProteinID:
QJB35650
UniProt:
A0AAE6ZPJ3
LinkDB
All DBs
Position
8116534..8117868
Genome browser
AA seq
444 aa
AA seq
DB search
MKRAFYFLAAACGIMLSPPLYAQQPADSVLTSATLQDCIRYALAHQPVLKQSQLDEAITD
RTVKSKLADWYPQINLDYNIQHYLELPTSIFGGNPTKVGVANTSNAAFGLNQNIFTRDLL
LASNTAKAVRKQSKQNTVRNQIDVVADVSKAYYDILLTNQQIQVLDEDIIRLERSLKDAR
NQYESGTVDKIDYKRASISLNNARAQQKSARELLTAKQVYLKQLMGYPESAGNVPLAYDT
TQMLQLVTGEDTTLTSDYQNRIEYQQLQTQQSLQKANLQYNKWSFLPSVSAFVNYNFAWQ
NQTFSKLYSTDYPNSLLGLKLSLPIFQGGKRIHNIKMAELQLQRIDWDFATLKNQINTQY
AQAMATYKSNLNDFNTLKENVAMAQDVYNMLQLQYKEGIKTYLDVLISETDLRTAQLSYY
NAMYQVLSSKIDLQKALGTLTANY
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagcattttattttttggcagctgcctgtgggatcatgttatcgccaccgctg
tatgcgcagcaaccggcagattccgttttaaccagcgccacgctgcaggattgtatccgg
tatgccctggcccatcaacctgtgctgaaacaatcacaactggatgaagctatcaccgac
cggaccgtcaaaagcaagctggccgactggtaccctcagatcaacctggactacaacatc
cagcactacctggagctgcccacctctatttttggtggtaaccctaccaaggtaggcgtg
gccaacacttccaacgccgcctttgggcttaaccagaacatcttcacccgtgacctgtta
ctggcctccaacacggccaaggctgtacgaaaacaaagtaagcagaacaccgtccgcaac
cagattgatgtggtggccgatgtcagcaaggcttattatgacattctgctgaccaaccag
cagatacaggtattggatgaagacatcataaggctggaacgcagcctcaaagatgcccgt
aaccagtatgaaagcggtactgtggacaagatcgactacaagcgcgccagcatctcgctg
aacaatgcacgcgcccagcagaagtcggcccgtgaactgctcaccgccaaacaggtgtac
ctgaaacagctgatggggtatccggaaagcgccggtaatgtaccgctggcctacgatacc
acacagatgctgcaactggtgacgggagaagacaccacgcttacttccgattaccagaac
aggatcgagtatcaacagctgcaaacacaacaaagcctgcagaaagccaacctgcaatac
aataaatggagcttcctgccttccgtgtcggcttttgtgaattacaacttcgcctggcag
aaccagaccttcagcaaattgtacagcaccgactatcctaactcgctgctggggctgaaa
ctgtcgctccccattttccagggcggtaagcggatacataatatcaaaatggctgagctg
cagctgcagcgcatcgactgggatttcgctacgctgaagaaccagatcaatacacagtat
gcgcaggcgatggccacctataaaagtaacctgaacgatttcaatacgctgaaagaaaac
gtggcgatggcgcaggacgtctataacatgctgcaactgcaatacaaggaaggcatcaag
acttacctcgatgtgttgatttcagaaacagacctgcgcacggcgcaactgagttattac
aacgctatgtaccaggtgctgtccagcaagatagacctgcaaaaagcattaggaacctta
actgctaattattaa
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