KEGG   PATHWAY: cpau00920
Entry
cpau00920                   Pathway                                
Name
Sulfur metabolism - Cupriavidus pauculus
Description
Sulfur is an essential element for life and the metabolism of organic sulfur compounds plays an important role in the global sulfur cycle. Sulfur occurs in various oxidation states ranging from +6 in sulfate to -2 in sulfide (H2S). Sulfate reduction can occur in both an energy consuming assimilatory pathway and an energy producing dissimilatory pathway. The assimilatory pathway, which is found in a wide range of organisms, produces reduced sulfur compounds for the biosynthesis of S-containing amino acids and does not lead to direct excretion of sulfide. In the dissimilatory pathway, which is restricted to obligatory anaerobic bacterial and archaeal lineages, sulfate (or sulfur) is the terminal electron acceptor of the respiratory chain producing large quantities of inorganic sulfide. Both pathways start from the activation of sulfate by reaction with ATP to form adenylyl sulfate (APS). In the assimilatory pathway [MD:M00176] APS is converted to 3'-phosphoadenylyl sulfate (PAPS) and then reduced to sulfite, and sulfite is further reduced to sulfide by the assimilatory sulfite reductase. In the dissimilatory pathway [MD:M00596] APS is directly reduced to sulfite, and sulfite is further reduced to sulfide by the dissimilatory sulfite reductase. The capacity for oxidation of sulfur is quite widespread among bacteria and archaea, comprising phototrophs and chemolithoautotrophs. The SOX (sulfur-oxidation) system [MD:M00595] is a well-known sulfur oxidation pathway and is found in both photosynthetic and non-photosynthetic sulfur-oxidizing bacteria. Green sulfur bacteria and purple sulfur bacteria carry out anoxygenic photosynthesis with reduced sulfur compounds such as sulfide and elemental sulfur, as well as thiosulfate (in some species with the SOX system), as the electron donor for photoautotrophic growth. In some chemolithoautotrophic sulfur oxidizers (such as Thiobacillus denitrificans), it has been suggested that dissimilatory sulfur reduction enzymes operate in the reverse direction, forming a sulfur oxidation pathway from sulfite to APS and then to sulfate.
Class
Metabolism; Energy metabolism
Pathway map
cpau00920  Sulfur metabolism
cpau00920

Module
cpau_M00595  Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:cpau00920]
Other DBs
GO: 0006790
Organism
Cupriavidus pauculus [GN:cpau]
Gene
EHF44_12815  sulfate ABC transporter substrate-binding protein [KO:K23163]
EHF44_12850  cysT; sulfate ABC transporter permease subunit CysT [KO:K02046]
EHF44_12855  cysW; sulfate ABC transporter permease subunit CysW [KO:K02047]
EHF44_12860  sulfate ABC transporter ATP-binding protein [KO:K02045] [EC:7.3.2.3]
EHF44_12820  sulfonate ABC transporter substrate-binding protein [KO:K15553]
EHF44_22825  ABC transporter substrate-binding protein [KO:K15553]
EHF44_12115  ABC transporter substrate-binding protein [KO:K15553]
EHF44_24515  ABC transporter substrate-binding protein [KO:K15553]
EHF44_11645  ABC transporter permease subunit [KO:K15554]
EHF44_12830  ssuC; aliphatic sulfonate ABC transporter permease SsuC [KO:K15554]
EHF44_24525  ABC transporter permease [KO:K15554]
EHF44_12125  ABC transporter permease [KO:K15554]
EHF44_12835  ATP-binding cassette domain-containing protein [KO:K15555] [EC:7.6.2.14]
EHF44_24520  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
EHF44_11640  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
EHF44_12120  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
EHF44_12825  ssuD; alkanesulfonate monooxygenase, FMNH(2)-dependent [KO:K04091] [EC:1.14.14.5 1.14.14.34]
EHF44_25360  msuE; FMN reductase [KO:K00299] [EC:1.5.1.38]
EHF44_08860  sulfate adenylyltransferase [KO:K00956] [EC:2.7.7.4]
EHF44_08855  cysD; sulfate adenylyltransferase subunit CysD [KO:K00957] [EC:2.7.7.4]
EHF44_08850  phosphoadenylyl-sulfate reductase [KO:K00390] [EC:1.8.4.8 1.8.4.10]
EHF44_06310  soxA; sulfur oxidation c-type cytochrome SoxA [KO:K17222] [EC:2.8.5.2]
EHF44_06315  soxX; sulfur oxidation c-type cytochrome SoxX [KO:K17223] [EC:2.8.5.2]
EHF44_06295  soxY; thiosulfate oxidation carrier protein SoxY [KO:K17226]
EHF44_06300  soxZ; thiosulfate oxidation carrier complex protein SoxZ [KO:K17227]
EHF44_06320  soxB; thiosulfohydrolase SoxB [KO:K17224] [EC:3.1.6.20]
EHF44_08840  nitrite/sulfite reductase [KO:K00381] [EC:1.8.1.2]
EHF44_06280  flavocytochrome C [KO:K17229] [EC:1.8.2.3]
EHF44_06040  MBL fold metallo-hydrolase [KO:K17725] [EC:1.13.11.18]
EHF44_09920  sulfurtransferase [KO:K01011] [EC:2.8.1.1 2.8.1.2]
EHF44_27165  sulfurtransferase [KO:K02439] [EC:2.8.1.1]
EHF44_16570  cysE; serine O-acetyltransferase [KO:K00640] [EC:2.3.1.30]
EHF44_04685  homoserine O-acetyltransferase [KO:K00641] [EC:2.3.1.31 2.3.1.46]
EHF44_11070  O-succinylhomoserine sulfhydrylase [KO:K10764] [EC:2.5.1.-]
EHF44_21320  selenium-binding protein [KO:K17285] [EC:1.8.3.4]
EHF44_14835  fatty-acid--CoA ligase [KO:K20034] [EC:6.2.1.44]
EHF44_13745  acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
EHF44_01930  acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
EHF44_03465  acyl-CoA dehydrogenase [KO:K20035] [EC:1.3.99.41]
Compound
C00033  Acetate
C00042  Succinate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00065  L-Serine
C00084  Acetaldehyde
C00087  Sulfur
C00094  Sulfite
C00097  L-Cysteine
C00155  L-Homocysteine
C00224  Adenylyl sulfate
C00245  Taurine
C00263  L-Homoserine
C00283  Hydrogen sulfide
C00320  Thiosulfate
C00409  Methanethiol
C00580  Dimethyl sulfide
C00979  O-Acetyl-L-serine
C01118  O-Succinyl-L-homoserine
C01861  Trithionate
C02084  Tetrathionate
C03920  2-(Methylthio)ethanesulfonate
C04022  S,S-Dimethyl-beta-propiothetin
C08276  3-(Methylthio)propanoate
C11142  Dimethyl sulfone
C11143  Dimethyl sulfoxide
C11145  Methanesulfonic acid
C15521  Alkanesulfonate
C17267  S-Sulfanylglutathione
C19692  Polysulfide
C20870  3-(Methylthio)propanoyl-CoA
C20955  3-(Methylthio)acryloyl-CoA
C22834  Protein-trisulfide
Reference
  Authors
Grein F, Ramos AR, Venceslau SS, Pereira IA
  Title
Unifying concepts in anaerobic respiration: Insights from dissimilatory sulfur metabolism.
  Journal
Biochim Biophys Acta 1827:145-60 (2013)
DOI:10.1016/j.bbabio.2012.09.001
Reference
  Authors
Fauque GD, Barton LL
  Title
Hemoproteins in dissimilatory sulfate- and sulfur-reducing prokaryotes.
  Journal
Adv Microb Physiol 60:1-90 (2012)
DOI:10.1016/B978-0-12-398264-3.00001-2
Reference
  Authors
Sakurai H, Ogawa T, Shiga M, Inoue K
  Title
Inorganic sulfur oxidizing system in green sulfur bacteria.
  Journal
Photosynth Res 104:163-76 (2010)
DOI:10.1007/s11120-010-9531-2
Reference
  Authors
Falkenby LG, Szymanska M, Holkenbrink C, Habicht KS, Andersen JS, Miller M, Frigaard NU
  Title
Quantitative proteomics of Chlorobaculum tepidum: insights into the sulfur metabolism of a phototrophic green sulfur bacterium.
  Journal
FEMS Microbiol Lett 323:142-50 (2011)
DOI:10.1111/j.1574-6968.2011.02370.x
Reference
  Authors
Gregersen LH, Bryant DA, Frigaard NU
  Title
Mechanisms and evolution of oxidative sulfur metabolism in green sulfur bacteria.
  Journal
Front Microbiol 2:116 (2011)
DOI:10.3389/fmicb.2011.00116
Reference
  Authors
Beller HR, Chain PS, Letain TE, Chakicherla A, Larimer FW, Richardson PM, Coleman MA, Wood AP, Kelly DP.
  Title
The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans.
  Journal
J Bacteriol 188:1473-88 (2006)
DOI:10.1128/JB.188.4.1473-1488.2006
Reference
PMID:9695921
  Authors
Pott AS, Dahl C
  Title
Sirohaem sulfite reductase and other proteins encoded by genes at the dsr locus of Chromatium vinosum are involved in the oxidation of intracellular sulfur.
  Journal
Microbiology 144 ( Pt 7):1881-94 (1998)
DOI:10.1099/00221287-144-7-1881
Reference
  Authors
Frigaard NU, Dahl C
  Title
Sulfur metabolism in phototrophic sulfur bacteria.
  Journal
Adv Microb Physiol 54:103-200 (2009)
DOI:10.1016/S0065-2911(08)00002-7
Related
pathway
cpau00260  Glycine, serine and threonine metabolism
cpau00270  Cysteine and methionine metabolism
cpau00680  Methane metabolism
cpau00720  Other carbon fixation pathways
KO pathway
ko00920   
LinkDB

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