Chaetura pelagica (chimney swift): 104390271
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Entry
104390271 CDS
T08631
Name
(RefSeq) interstitial collagenase-like
KO
K01388
matrix metalloproteinase-1 (interstitial collagenase) [EC:
3.4.24.7
]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
104390271
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpea01002
]
104390271
Enzymes [BR:
cpea01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.7 interstitial collagenase
104390271
Peptidases and inhibitors [BR:
cpea01002
]
Metallo peptidases
Family M10
104390271
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
Reprolysin_4
Peptidase_M54
DUF4953
Peptidase_M66
Metallopep
Motif
Other DBs
NCBI-GeneID:
104390271
NCBI-ProteinID:
XP_009997677
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MKAFSLLLLLYVTLSSAFPVAPEAEDEGKTLELVETYLQNFYNLQRDHQPHLRNKGENPL
AAKLKEMQAFFGLQVTGKPDLRTLEIMKKPRCGIPDIGEYVFTKGNPKWKSNHLTYRILN
YTPKMRQADTEEAIKKALSVWSKVTPLTFRRVEDEEADIVISFAYRDHRDNSPFDGPNGQ
LAHAFQPGEGIGGDVHLDEEEAWTKDGRGYNLFIVVAHELGHSLGLSHSTDPGALMYPAY
SYTDPNEFLLPQDDIDGIQAIYGKSNAAVQPTGPVTPEACDPNLTFDAIATLRGEIIFFK
DRYMLRKHPARTVTERNFISLFWSKLPSGIQAAYENIETDEVLVFKEDKYWVIRGYDIAP
GYPKPIYHLGFPKTVKRVNAAYSDENTGKTYFFIADRYWRYDENKKSMDHGYPRKIVSDF
GKIGRVDAAFQKDGYVYFFHGTTQFQFDPHTKRIVRQMKSISWFNC
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgttttcacttctcctgttgctatatgtgaccctctcatctgcatttcctgtg
gctccagaagcagaagatgaaggcaaaaccctagagcttgtagagacttatctacagaat
ttctacaatcttcaaagagatcatcagcctcatttaagaaacaagggtgaaaatcccctt
gctgcaaagctcaaggaaatgcaggcattctttggactacaagtgactgggaaacctgat
cttcgcactttggagattatgaaaaagcccagatgtggtatacctgatataggggaatac
gtgttcacaaaagggaatcccaaatggaaaagtaatcatctgacatacaggattttgaat
tacactccaaaaatgagacaagctgatacagaggaagcaatcaaaaaagctctcagtgtc
tggagcaaagtgacaccattgacgttcagaagggttgaggacgaagaagcagatattgtg
atctcttttgcttatagagaccaccgtgacaactcaccttttgatggccccaatgggcag
ctggctcatgctttccagcctggtgaaggtattggcggtgatgtgcatcttgatgaggag
gaagcctggacaaaagatggaaggggctacaatttgttcattgttgtggcccatgagctt
ggtcattcactgggtctgtctcattcaactgatcctggggcactgatgtatccagcttac
tcctacacagaccccaatgaattccttcttcctcaggatgatattgatggcattcaagcc
atctatggtaagtctaatgctgctgtgcagccaacaggacctgtaactccagaagcttgt
gacccaaatctgacgtttgatgctattgctacactacgtggggaaataatcttctttaag
gacagatatatgctgcgcaaacatcctgcaaggacagtgacagagcgtaattttatctca
ctgttctggtccaagttgccatcaggaattcaagctgcttatgaaaacattgagacggat
gaagttttagtttttaaagaggataaatattgggttatcagaggatatgacattgcacct
ggctatcctaaaccaatctatcatttgggattcccaaagactgttaaaagagttaatgca
gcttacagtgatgaaaacacaggaaaaacatacttctttatagctgacagatactggagg
tatgatgagaataaaaaatccatggatcacggttatcccaggaaaatagtgtccgatttt
ggaaaaattggcagagttgatgctgctttccaaaaagatggctatgtctacttcttccat
ggaacaactcagttccagtttgatcctcacaccaaaaggattgttagacaaatgaagagc
atcagctggtttaattgttaa
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