Chitinophaga pinensis: Cpin_4942
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Entry
Cpin_4942 CDS
T00959
Name
(GenBank) outer membrane efflux protein
KO
K12340
outer membrane protein
Organism
cpi
Chitinophaga pinensis
Pathway
cpi01501
beta-Lactam resistance
cpi01503
Cationic antimicrobial peptide (CAMP) resistance
cpi02020
Two-component system
cpi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cpi00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Cpin_4942
09132 Signal transduction
02020 Two-component system
Cpin_4942
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Cpin_4942
01503 Cationic antimicrobial peptide (CAMP) resistance
Cpin_4942
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpi02000
]
Cpin_4942
02044 Secretion system [BR:
cpi02044
]
Cpin_4942
01504 Antimicrobial resistance genes [BR:
cpi01504
]
Cpin_4942
Transporters [BR:
cpi02000
]
Other transporters
Pores ion channels [TC:
1
]
Cpin_4942
Secretion system [BR:
cpi02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Cpin_4942
RTX toxin transporter
Cpin_4942
Multiple protein transporter
Cpin_4942
RaxAB-RaxC type I secretion system protein
Cpin_4942
Antimicrobial resistance genes [BR:
cpi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Cpin_4942
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Cpin_4942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ACU62375
UniProt:
A0A979GZ95
LinkDB
All DBs
Position
complement(6179607..6180956)
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AA seq
449 aa
AA seq
DB search
MFSNYIHRFLFWILIFRIVPTYAQDTAASQVQLPEKWDLQACLDYAKTNNITLNSYRLNR
LSSQQDLELSKAAVLPNLSASASPSLIQSKTIDPATGDLKSGVRFSGSSSLNSSVTLYNG
GYLKTDIQQKDLLVKIAGLDLATVENDITLQITQAYLNILLAKENIVYVRDVVATSTAQV
QQQQQFYDVGAVALKDLVQLQAQLANDKYTLVTAENTHRQNLLTLKQLLQLPTVTPFEIV
EPDTLMGNALLTPLLDAQQTALATRPEVKSSELGVQVASLDVRKARAGYLPALTAGAGLG
TSYAHNDNYSFLRQLDNNFYQQVGLTLSVPIFSRRANRVNEEKAKIGVGQAELTLQNTRT
NLSQEVERAYINVQNAQGQYDAAVEQLRYTQEAYRIANEQLKIGAANTVEVLQQKNLYVQ
SMQSYIQAKYAAALYIRIYDFYRGVPVHL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaattatatacatcggttcctcttttggatattgattttcagaatagttcct
acatatgcacaggacaccgccgcttcgcaggtgcaattacctgagaaatgggacttgcag
gcttgtctggactatgccaaaaccaataacattacactaaacagttaccggttaaatcgc
cttagcagtcagcaggatctggagctgtcgaaagccgctgtgctacccaacctttctgcc
agcgcatccccttcattgatacagagtaagaccatcgatccggccaccggtgatttgaaa
tcgggcgtacggttttctgggagtagttcgctgaattcatcagtgacattgtataatggc
ggatacctgaagacggatattcaacagaaagatttgctggtgaagattgcgggactggat
cttgcgacggttgaaaatgatatcacgctgcagatcacgcaggcttatcttaatattctg
ctggctaaagaaaatatcgtgtatgtcagggacgtagtggctacgtccactgcgcaggtg
cagcaacagcaacagttttatgatgtaggtgcggtcgcgttgaaagatcttgttcagtta
caggcgcagctggccaatgataaatatacgcttgtcacagccgaaaatacacaccggcaa
aacttactgacgctgaaacaattactgcaattgccgacggtcactccctttgagatcgtt
gagccggatacactgatgggtaacgctctactgacgccattactggatgcacagcagacg
gcattggctacgcggcctgaggtgaaaagcagtgaactgggtgtacaggtagcctcactg
gacgtcaggaaagccagggcgggatatctgccggcattgactgctggtgcaggattaggt
accagttatgcgcataatgataattactcttttttacgacagctggataacaatttttat
cagcaggttgggctgactttatcggtacccattttcagccgtcgcgcgaacagggtgaat
gaggaaaaggcgaaaataggcgtaggtcaggccgagctgacgttacagaatacacgtacc
aatctgtcgcaggaagtggagcgtgcatacattaatgtgcagaatgcgcaagggcaatat
gacgcagccgttgaacagttgcgttatacccaggaagcctaccggattgccaatgaacaa
ctgaaaatcggtgcagcgaataccgtagaagtgttacaacagaagaatctctatgtccag
tccatgcagtcatacattcaggccaaatacgcagcagcgctgtatatcaggatatatgat
ttctacaggggcgtgccagtccatttatag
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