Collimonas pratensis: CPter91_3898
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Entry
CPter91_3898 CDS
T04306
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
cpra
Collimonas pratensis
Pathway
cpra01501
beta-Lactam resistance
cpra02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpra00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPter91_3898
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CPter91_3898
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpra02000
]
CPter91_3898
01504 Antimicrobial resistance genes [BR:
cpra01504
]
CPter91_3898
Transporters [BR:
cpra02000
]
Other transporters
Pores ion channels [TC:
1
]
CPter91_3898
Antimicrobial resistance genes [BR:
cpra01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CPter91_3898
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
CPter91_3898
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
CPter91_3898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AMP06219
UniProt:
A0A127Q820
LinkDB
All DBs
Position
4046747..4048252
Genome browser
AA seq
501 aa
AA seq
DB search
MKHSQAPMYKTLLAAAAAALFLSACAVGPDYVRPGTEEPVAFKENKDWKTATPKDQELRG
NWWEIYQDPQLNSLVEQVNISNQNLVQAEAQFRQAAALVQSARAAYLPTVSASVSATRSG
GGRNSSSTLVNSANGGSVSNSFSLGPSVSWEPDLWGRISRTVEANQATAQASAADLQATR
LSAQATLAQDYLQLRVLDAQQKLLDDTVAAYQKSYQLTQNQYAVGVVAKSDVIQAQTQLK
GAQAQALDNGVLRAQLEHAIAMLTGQPASTFSIPPTTMVAVLPAIPVGVPSTLLERRPDI
SGAERRAAAANAQIGVAKAAYFPNLTLSASGGFQSNSFANWLTVPNRIWSLGPALAATLF
DGGARRAQSDQAIAGFDASVAAYKQTVLTGFQEVEDNLAALRILEQEAAVQDETVKSARL
AVELILNQYKSGLVNYTSVATVQATALSAERSALDIQNRRLSASVLLIKALGGGWDQSQL
PANKVLNDRDATIAGAKPAAQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaaacactcgcaagcacccatgtataaaaccttgctggcggcggcagctgcggcgctg
ttcttgagcgcctgcgcggtcggtcctgactatgtgcggccaggtaccgaagaaccggtc
gccttcaaggaaaacaaggattggaaaaccgccacgccgaaagaccaggaactgcgcggc
aactggtgggaaatctatcaggatccacagctcaacagcctggtcgagcaggtcaacatc
tccaatcagaatctggtgcaggccgaagcgcagttccgccaggcggcggcgctggtgcaa
tcggcccgggctgcctacctgccgacggtgtctgccagcgtttccgccacccgctccggc
ggcggccgcaacagcagcagcactctcgtcaacagcgccaatggcggctcggtgtcgaac
agcttctcgctcggcccaagcgtcagctgggagcccgacctgtggggccgcatcagccgc
acggtggaagccaaccaggctacggcccaggccagcgcagcggacctgcaggcaacccgg
ctgagcgcgcaagctacgctggcacaagactacctgcaattgcgggtgctcgacgcgcag
caaaaactgctcgacgataccgtggccgcgtatcagaaatcgtatcagctgacgcagaac
cagtatgcggtcggggtggtcgccaaatccgacgtcatccaggcccagacccagctcaag
ggtgcacaggcgcaggccttggacaatggcgtgctgcgcgcccagctggagcatgccatc
gccatgctgaccggacagccggcctcgactttctcgattccacctaccaccatggtggcg
gtgctgccggcgatcccggtcggcgtcccttccaccctgctggaacggcgtcctgacatc
agcggcgccgagcgccgcgcggcggcagccaatgcccagatcggggtcgccaaggcagcc
tattttccgaacctgacgctgtccgcttccggcggcttccaaagcaacagctttgccaac
tggctgaccgtgccgaaccgcatctggtcgctcggaccggcgctggcggccaccctgttt
gacggtggcgcccggcgtgcccagagcgaccaggcgatcgccggtttcgacgccagcgtc
gccgcctacaaacagaccgtgctgaccggcttccaggaagtcgaagacaacctggcggcc
ctgcgcatcctggaacaggaagcggcggtgcaggatgaaacggtcaagtcggcgcgtctg
gcggtggagctgatcctcaaccagtacaagtccggcctggtgaattacactagcgtggcg
acggtgcaggcaactgcactcagcgccgagcggtcggcgctggatatccagaaccggcgc
ctgtctgccagcgtattgctgatcaaggcgctgggcggcggctgggatcagagccagctg
ccggccaacaaagtgctgaatgaccgcgacgccaccattgccggcgccaagccggccgcg
caatag
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