Colwellia psychrerythraea: CPS_4646
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Entry
CPS_4646 CDS
T00258
Name
(GenBank) RND efflux system, outer membrane lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
cps
Colwellia psychrerythraea
Pathway
cps01501
beta-Lactam resistance
cps02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cps00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CPS_4646
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CPS_4646
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cps02000
]
CPS_4646
01504 Antimicrobial resistance genes [BR:
cps01504
]
CPS_4646
Transporters [BR:
cps02000
]
Other transporters
Pores ion channels [TC:
1
]
CPS_4646
Antimicrobial resistance genes [BR:
cps01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CPS_4646
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
CPS_4646
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
CPS_4646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
AAZ24088
UniProt:
Q47V79
LinkDB
All DBs
Position
4906295..4907689
Genome browser
AA seq
464 aa
AA seq
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MTRRFRLLLPLFSSLLLLACSSTSQVDEKLKDLPLPKNWQDSQQALAVEHNWLSELDNLQ
VHQLVKKALAANHQFAMQAYTLEIAEQQLIISGSQLWPELDLAFRSGRNKDNQTDSYSNS
NSVNLNLSYEVDIWGKLSDADRMTNYNYLAQKATFEQYKQQLVVNVLTTWFRVIEAEKLL
ALYRSRVANSQQNLAIIEAGYNSGLTAALDVYLTRNDLNNELTRVSEQETERTKLIRQLE
RLIGEYPKGELLVNANLPLLTTDIPVGLPSELISRKPELKASWYQLLSQDAGLAYAHKQR
FPSIVLSGSIGDSTADIGDLLSGSSLAWSLLGSVSAPIFNAGRLKANEEKARIELKQGEQ
LYLDTLYNAFSDVENAITTEKNLKNSYYTMLAAQENAKIASTLSFEQYQSGLVTYTTVLD
AQNRSFEAQSTLIKIKNQLIANRINLHLSLGGDFTTPSLENKAE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgacacgtcgatttcgactactgcttccattattctcaagcctgttattattagcttgc
agtagcacttcacaagtagatgaaaaattaaaagaccttcctcttcccaaaaactggcaa
gatagccaacaagccttggccgttgaacataattggttatctgaacttgataacttacaa
gttcatcaattagtaaaaaaggcattagcggctaaccatcaatttgccatgcaagcttac
acactcgaaatagccgaacagcaacttatcatctcgggtagccaactttggccagagctt
gatctagcatttcgtagtggccgtaataaagacaatcaaaccgatagttattcaaacagt
aactcagttaacttgaatttaagctatgaagtggatatttggggcaagttatctgatgcc
gatcgcatgactaattataactatctcgcgcaaaaagccacttttgagcaatacaagcag
cagcttgttgtcaacgtattaacaacttggtttcgcgtgattgaggcagaaaaattgctc
gccctttatcgcagcagagttgcaaattctcagcagaatttagctatcattgaagcaggc
tataattcagggttaaccgctgcacttgatgtctacttaacacgtaacgatttgaacaac
gagttaacgagagtatcagagcaagaaacagaaagaaccaaactaattagacagcttgaa
cgcttgattggtgaatatccgaaaggcgagcttttagtcaatgctaacttacctttactc
accacagacattcctgttggcttaccgtcagaactaatcagccgaaagccagaattaaaa
gccagttggtatcaattgttatcgcaagatgccggcttagcttatgcgcataaacaacgt
tttcctagcattgtattatcaggttcgatcggtgactctaccgcagacattggtgactta
ctctctggttcttcattggcatggtcactactgggcagtgtctcagcacccatttttaat
gctgggcgcctgaaagcaaatgaagaaaaagcccgtatagaactcaaacaaggtgaacag
ttgtaccttgatactttatataacgcttttagtgatgttgaaaatgctatcaccactgaa
aagaacttaaagaacagttattacaccatgttggccgcacaagaaaatgcaaaaatcgcc
tccacattatctttcgaacaataccaaagtggtttagttacctataccacggtgcttgat
gcgcaaaaccgttcttttgaagcacaatcgacactgataaaaattaaaaaccaactcatt
gccaatagaatcaatttacatctttccttgggtggcgacttcaccacgccgtcacttgaa
aataaggccgaataa
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